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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA690124" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA690124 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6282751 6282751 PRJNA690124_P_NODE_55725_length_242_cov_0.923077_g55359_i0 PRJNA690124 55725 242 0.923077 2.23384634 Nitrososphaera 497726 Archaea Archaea 143 1.2599999999999998e-29   NTclustered gi|647810480|gb|CP007536.1| 926571 g55359 i0 92.079 2.87190082644628 101 8 42 0 142 242 889406 889506 Nitrososphaera viennensis EN76, complete genome blastn 695 143 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera viennensis
8322919 8322919 PRJNA690124_P_NODE_5867_length_658_cov_1.793162_g5513_i0 PRJNA690124 5867 658 1.793162 11.79900596 Natronorubrum daqingense 588898 Archaea Archaea 69.4 6.5e-7   NTclustered gi|1134979927|gb|CP019327.1| 588898 g5513 i0 85.294 0.103343465045593 68 8 10 2 326 392 592951 592885 Natronorubrum daqingense strain JX313, complete sequence blastn 68 69.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum daqingense
14698492 14698492 PRJNA690124_P_NODE_46792_length_250_cov_0.881356_g46426_i0 PRJNA690124 46792 250 0.881356 2.20339 Candidatus Nitrosotenuis chungbukensis 1353246 Archaea Archaea 156 1.68e-33   NTclustered gi|2551106379|gb|CP130341.1| 1353246 g46426 i0 78.75 1.492 240 45 94 5 15 250 1182105 1181868 Candidatus Nitrosotenuis chungbukensis strain MY2 chromosome, complete genome blastn 373 156 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis chungbukensis
18521671 18521671 PRJNA690124_P_NODE_49995_length_247_cov_0.896552_g49629_i0 PRJNA690124 49995 247 0.896552 2.21448344 Candidatus Nitrosotenuis sp. DW1 2259672 Archaea Archaea 340 4.25e-89   NTclustered gi|1869227213|gb|CP030846.1| 2259672 g49629 i0 91.498 2 247 21 100 0 1 247 21097 21343 Candidatus Nitrosotenuis sp. DW1 chromosome, complete genome blastn 494 340 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp. DW1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;