RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA690124" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690124 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9597494 9597494 PRJNA690124_P_NODE_17988_length_382_cov_1.006472_g17622_i0 PRJNA690124 17988 382 1.006472 3.84472304 Lichtheimia ornata 688661 Fungi Fungi 102 3.57e-17   NTclustered gi|2553560071|ref|XM_058483052.1| 688661 g17622 i0 85 1.19371727748691 100 15 26 0 229 328 155 56 Lichtheimia ornata peroxiredoxin (O0I10_002977), partial mRNA blastn 456 102 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
10872996 10872996 PRJNA690124_P_NODE_18589_length_376_cov_1.339934_g18223_i0 PRJNA690124 18589 376 1.339934 5.03815184 Calcarisporiella thermophila 911321 Fungi Fungi 204 9.34e-48   NTclustered gi|2837841323|ref|XM_069390429.1| 911321 g18223 i0 84.038 21.2393617021277 213 32 56 2 78 289 248 459 Calcarisporiella thermophila 40S ribosomal protein uS19 (VTP21DRAFT_11028), partial mRNA blastn 7986 204 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
22346869 22346869 PRJNA690124_P_NODE_45258_length_251_cov_1.219101_g44892_i0 PRJNA690124 45258 251 1.219101 3.05994351 Gamsiella multidivaricata 101098 Fungi Fungi 219 2.1199999999999998e-52   NTclustered gi|2323787328|ref|XM_051556087.1| 101098 g44892 i0 89.941 71.0677290836653 169 17 67 0 83 251 887 719 Gamsiella multidivaricata 60S ribosomal protein L3 (BC939DRAFT_454620), mRNA blastn 17838 219 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;