RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA690124" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690124 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6282353 6282353 PRJNA690124_P_NODE_24445_length_332_cov_0.891892_g24079_i0 PRJNA690124 24445 332 0.891892 2.96108144 Metazoa 33208 Mollusca Mollusca 174 6.4e-39   NTclustered gi|28411617|dbj|AB103134.1| 106318 g24079 i0 77.644 42.0451807228916 331 45 99 18 3 332 3142 2840 Parvamussium intuscostatum gene for ITS2, 28S rRNA, partial sequence, country:Japan: central Honshu (Misaki) blastn 13959 174 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Propeamussiidae Parvamussium Parvamussium intuscostatum
9597563 9597563 PRJNA690124_P_NODE_21868_length_348_cov_1.629091_g21502_i0 PRJNA690124 21868 348 1.629091 5.66923668 Argopecten irradians 31199 Mollusca Mollusca 265 3.89e-66   NTclustered gi|2835371159|ref|XM_069259847.1| 31199 g21502 i0 81.424 90.0804597701149 323 60 93 0 24 346 150 472 PREDICTED: Argopecten irradians actin, cytoplasmic-like (LOC138317873), mRNA blastn 31348 265 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
10107320 10107320 PRJNA690124_P_NODE_46288_length_250_cov_1.322034_g45922_i0 PRJNA690124 46288 250 1.322034 3.305085 Haliotis 6452 Mollusca Mollusca 80.5 1.04e-10   NTclustered gi|2245661101|ref|XM_046473226.2| 6454 g45922 i0 88.06 0.536 67 8 27 0 17 83 948 882 PREDICTED: Haliotis rufescens calponin-1-like (LOC124113004), mRNA blastn 134 80.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
10873287 10873287 PRJNA690124_P_NODE_33349_length_287_cov_1.822430_g32983_i0 PRJNA690124 33349 287 1.82243 5.2303741 Littorina saxatilis 31220 Mollusca Mollusca 139 1.98e-28   NTclustered gi|2868674442|ref|XM_070346359.1| 31220 g32983 i0 77.5 2.50871080139373 240 48 83 4 51 287 954 718 PREDICTED: Littorina saxatilis calponin-1-like (LOC138973627), transcript variant X3, mRNA blastn 720 139 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
10873852 10873852 PRJNA690124_P_NODE_7269_length_595_cov_1.208812_g6908_i0 PRJNA690124 7269 595 1.208812 7.1924314 Ostrea edulis 37623 Mollusca Mollusca 156 4.36e-33   NTclustered gi|2507407891|ref|XM_048917896.2| 37623 g6908 i0 77.821 3.33613445378151 257 53 43 4 51 306 2531 2278 PREDICTED: Ostrea edulis polyadenylate-binding protein 4-like (LOC125679019), mRNA blastn 1985 156 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis
17246749 17246749 PRJNA690124_P_NODE_13834_length_433_cov_1.688889_g13469_i0 PRJNA690124 13834 433 1.688889 7.31288937 Platevindex sp. XL-2018 2136288 Mollusca Mollusca 213 1.81e-50   NTclustered gi|1369214222|gb|KY646463.1| 2136288 g13469 i0 76.247 62.4087759815243 421 88 96 11 5 419 3574 3160 Platevindex sp. XL-2018 myosin heavy chain mRNA, complete cds blastn 27023 213 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Systellommatophora Onchidiidae Platevindex Platevindex sp. XL-2018
23622055 23622055 PRJNA690124_P_NODE_30999_length_297_cov_2.178571_g30633_i0 PRJNA690124 30999 297 2.178571 6.47035587 Liolophura japonica 13599 Mollusca Mollusca 209 1.55e-49   NTclustered gi|2724235633|ref|XM_064742816.1| 13599 g30633 i0 84.689 47.0841750841751 209 32 70 0 5 213 209 1 PREDICTED: Liolophura japonica tubulin beta chain (LOC135465566), mRNA blastn 13984 209 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
24896108 24896108 PRJNA690124_P_NODE_9400_length_524_cov_1.860310_g9035_i0 PRJNA690124 9400 524 1.86031 9.7480244 Littorina saxatilis 31220 Mollusca Mollusca 307 9.93e-79   NTclustered gi|2868614015|ref|XM_070321681.1| 31220 g9035 i0 79.075 39.6679389312977 454 89 86 6 23 473 567 117 PREDICTED: Littorina saxatilis eukaryotic translation elongation factor 2-like (LOC138949893), mRNA blastn 20786 307 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;