RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA690124" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690124 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1945864 1945864 PRJNA690124_P_NODE_5842_length_659_cov_2.443686_g5488_i0 PRJNA690124 5842 659 2.443686 16.10389074 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 401 5.649999999999999e-107   NTclustered gi|2522768008|gb|OR162445.1| 646526 g5488 i0 84.841 5.52959028831563 409 51 90 10 256 659 2533 2935 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3644 401 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
7047448 7047448 PRJNA690124_P_NODE_13206_length_442_cov_3.945799_g12841_i0 PRJNA690124 13206 442 3.945799 17.44043158 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 420 1.0199999999999997e-112   NTclustered gi|2522768008|gb|OR162445.1| 646526 g12841 i0 84.282 7.14705882352941 439 59 98 10 10 442 2189 1755 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3159 420 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
7047453 7047453 PRJNA690124_P_NODE_13366_length_440_cov_1.520436_g13001_i0 PRJNA690124 13366 440 1.520436 6.6899184 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 420 1.0099999999999999e-112   NTclustered gi|2522768008|gb|OR162445.1| 646526 g13001 i0 95.455 19.2045454545455 264 11 60 1 177 439 3206 3469 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8450 420 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
18520875 18520875 PRJNA690124_P_NODE_11395_length_477_cov_1.294554_g11030_i0 PRJNA690124 11395 477 1.294554 6.17502258 Enterocytozoon sp. ex Acetes sibogae australis 2881109 Fungi Fungi 586 1.0299999999999997e-162   NTclustered gi|2108103202|gb|OK413268.1| 2881109 g11030 i0 88.889 100.220125786164 477 51 100 1 1 477 742 268 Enterocytozoon sp. ex Acetes sibogae australis isolate RA19015_21 small subunit ribosomal RNA gene, partial sequence blastn 47805 586 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon sp. ex Acetes sibogae australis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;