RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA690124" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690124 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
669533 669533 PRJNA690124_P_NODE_45041_length_251_cov_2.471910_g44675_i0 PRJNA690124 45041 251 2.47191 6.2044941 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 459 1.1499999999999996e-124   NTclustered gi|681870004|gb|KM001687.1| 1542451 g44675 i0 99.602 57.7450199203187 251 1 100 0 1 251 1075 825 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 14494 459 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
1945561 1945561 PRJNA690124_P_NODE_44522_length_252_cov_0.871508_g44156_i0 PRJNA690124 44522 252 0.871508 2.19620016 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 52.8 0.023   NTclustered gi|1524878282|ref|XM_027190912.1| 46731 g44156 i0 100 0.111111111111111 28 0 11 0 53 80 3227 3254 PREDICTED: Pocillopora damicornis ribosome-binding protein 1-like (LOC113674431), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
14697725 14697725 PRJNA690124_P_NODE_10232_length_502_cov_1.606061_g9867_i0 PRJNA690124 10232 502 1.606061 8.06242622 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 71.3 1.35e-7   NTclustered gi|2782887107|ref|XM_067065305.1| 252671 g9867 i0 82.716 0.51593625498008 81 12 16 2 319 398 386 465 PREDICTED: Clytia hemisphaerica cathepsin L-like (LOC136808767), mRNA blastn 259 71.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
14697782 14697782 PRJNA690124_P_NODE_12772_length_450_cov_1.663130_g12407_i0 PRJNA690124 12772 450 1.66313 7.484085 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 826 0   NTclustered gi|681870005|gb|KM001688.1| 1542451 g12407 i0 99.778 56.2177777777778 450 1 100 0 1 450 1265 1714 Myxidium streisingeri clone ZF10 18S small subunit ribosomal RNA gene, partial sequence blastn 25298 826 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
15971794 15971794 PRJNA690124_P_NODE_25153_length_327_cov_1.830709_g24787_i0 PRJNA690124 25153 327 1.830709 5.98641843 Anemonia sulcata 6108 Cnidaria other_Eukaryota 58.4 6.61e-4   NTclustered gi|2917940693|emb|OZ237556.1| 6108 g24787 i0 94.737 0.116207951070336 38 1 12 1 11 48 15596129 15596165 Anemonia sulcata genome assembly, chromosome: 2 blastn 38 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
15972209 15972209 PRJNA690124_P_NODE_44673_length_252_cov_0.871508_g44307_i0 PRJNA690124 44673 252 0.871508 2.19620016 Henneguya salminicola 69463 Cnidaria other_Eukaryota 134 7.93e-27   NTclustered gi|2663986575|emb|OY756916.1| 69463 g44307 i0 94.253 28.3373015873016 87 5 35 0 1 87 6560 6646 Henneguya salminicola isolate Hz1 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 7141 134 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Henneguya Henneguya salminicola

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;