RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA690124" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA690124 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
669520 669520 PRJNA690124_P_NODE_44581_length_252_cov_0.871508_g44215_i0 PRJNA690124 44581 252 0.871508 2.19620016 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 80.5 1.05e-10   NTclustered gi|2546137839|emb|OY282432.1| 3036252 g44215 i0 87.143 0.277777777777778 70 9 28 0 182 251 1262306 1262237 MAG: uncultured Candidatus Binatia bacterium isolate 81991fb1-66cf-4eb3-b653-309a223604dd genome assembly, chromosome: 1 blastn 70 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
24895655 24895655 PRJNA690124_P_NODE_41740_length_257_cov_1.271739_g41374_i0 PRJNA690124 41740 257 1.271739 3.26836923 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 254 5.970000000000001e-63   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g41374 i0 85.039 199.735408560311 254 33 98 4 6 257 161426 161176 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 51332 254 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;