RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA689790" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA689790 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
668709 668709 PRJNA689790_S_NODE_13281_length_165_cov_0.992188_g13166_i0 PRJNA689790 13281 165 0.992188 1.6371102 Linderina pennispora 61395 Fungi Fungi 130 6.2e-26   NTclustered gi|2028315032|ref|XM_040886629.1| 61395 g13166 i0 80.982 1.98787878787879 163 31 99 0 3 165 770 608 Linderina pennispora Metallo-dependent phosphatase (DL89DRAFT_265371), mRNA blastn 328 130 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
16480979 16480979 PRJNA689790_S_NODE_2593_length_396_cov_2.476323_g2478_i0 PRJNA689790 2593 396 2.476323 9.80623908 Fungi 4751 Fungi Fungi 263 1.61e-65   NTclustered gi|2028324920|ref|XM_040888337.1| 61395 g2478 i0 80.165 19.3939393939394 363 62 90 10 1 358 47 404 Linderina pennispora uncharacterized protein (DL89DRAFT_269536), partial mRNA blastn 7680 263 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
22346068 22346068 PRJNA689790_S_NODE_13198_length_165_cov_1.757812_g13083_i0 PRJNA689790 13198 165 1.757812 2.9003898 Linderina pennispora 61395 Fungi Fungi 56.5 0.001   NTclustered gi|2028326744|ref|XM_040891995.1| 61395 g13083 i0 86.792 0.490909090909091 53 3 31 3 83 133 569 519 Linderina pennispora translationally-controlled tumor protein (DL89DRAFT_70697), mRNA blastn 81 56.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
22346070 22346070 PRJNA689790_S_NODE_13538_length_163_cov_3.063492_g13423_i0 PRJNA689790 13538 163 3.063492 4.99349196 Kickxella alabastrina 61397 Fungi Fungi 62.1 2.26e-5   NTclustered gi|2324008288|ref|XM_051539526.1| 61397 g13423 i0 85.965 0.674846625766871 57 8 35 0 7 63 217 161 Kickxella alabastrina ribosomal protein S10 domain-containing protein (BX661DRAFT_85603), mRNA blastn 110 62.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
22346127 22346127 PRJNA689790_S_NODE_8598_length_201_cov_4.012195_g8483_i0 PRJNA689790 8598 201 4.012195 8.06451195 Kickxella alabastrina 61397 Fungi Fungi 110 1.02e-19   NTclustered gi|2324017890|ref|XM_051536612.1| 61397 g8483 i0 85.185 6.06467661691542 108 14 53 2 32 138 1263 1157 Kickxella alabastrina ribosomal protein L3-domain-containing protein (BX661DRAFT_184853), mRNA blastn 1219 110 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;