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contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJNA689790" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA689790 · 26 ✖

analysis 1

  • blastn · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
668704 668704 PRJNA689790_S_NODE_12321_length_170_cov_1.759398_g12206_i0 PRJNA689790 12321 170 1.759398 2.9909766 Philodina roseola 96448 Rotifera other_Eukaryota 281 1.67e-71   NTclustered gi|187936090|gb|EU652318.1| 96448 g12206 i0 96.471 10.4764705882353 170 6 100 0 1 170 5900 6069 Philodina roseola 7TM protein 66, histone H4, histone H3, histone H2B, osteopetrosis associated transmembrane protein, cleft lip and palate associated transmembrane protein, ribosomal protein s15a, hypothetical protein 20, START domain containing protein, filament protein, hypothetical protein 21, putative GPCR, and hypothetical protein 22 genes, complete cds blastn 1781 281 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
668763 668763 PRJNA689790_S_NODE_5921_length_246_cov_1.708134_g5806_i0 PRJNA689790 5921 246 1.708134 4.20200964 Philodina roseola 96448 Rotifera other_Eukaryota 252 2.04e-62   NTclustered gi|197321819|gb|EU853695.1| 96448 g5806 i0 90.256 2.30081300813008 195 16 79 2 1 195 301 492 Philodina roseola histone H2A variant H2Av1 copy 1a (H2Av1) gene, partial cds blastn 566 252 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
7047299 7047299 PRJNA689790_S_NODE_11366_length_176_cov_2.517986_g11251_i0 PRJNA689790 11366 176 2.517986 4.43165536 Brachionus plicatilis 10195 Rotifera other_Eukaryota 147 6.619999999999999e-31   NTclustered gi|218117260|emb|AM980958.1| 10195 g11251 i0 81.977 5.1875 172 31 98 0 5 176 317 146 Brachionus plicatilis partial mRNA for 40S ribosomal protein S11, (RPS11 gene) blastn 913 147 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
7047337 7047337 PRJNA689790_S_NODE_3866_length_313_cov_1.974638_g3751_i0 PRJNA689790 3866 313 1.974638 6.18061694 Brachionus plicatilis 10195 Rotifera other_Eukaryota 182 3.58e-41   NTclustered gi|218117265|emb|AM980960.1| 10195 g3751 i0 81.448 0.706070287539936 221 41 71 0 17 237 269 49 Brachionus plicatilis partial mRNA for 40S ribosomal protein S20, (RPS20 gene) blastn 221 182 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
8321876 8321876 PRJNA689790_S_NODE_3647_length_324_cov_2.592334_g3532_i0 PRJNA689790 3647 324 2.592334 8.39916216 Brachionus plicatilis 10195 Rotifera other_Eukaryota 71.3 8.4e-8   NTclustered gi|218117256|emb|AM980956.1| 10195 g3532 i0 81.395 0.787037037037037 86 16 27 0 239 324 153 68 Brachionus plicatilis partial mRNA for 60S ribosomal protein L39, (RPL39 gene) blastn 255 71.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
8321897 8321897 PRJNA689790_S_NODE_7627_length_214_cov_1.310734_g7512_i0 PRJNA689790 7627 214 1.310734 2.80497076 Brachionus plicatilis 10195 Rotifera other_Eukaryota 182 2.3e-41   NTclustered gi|255733357|gb|FJ555370.1| 10195 g7512 i0 85.549 2.71028037383178 173 25 81 0 20 192 784 956 Brachionus plicatilis methionine adenosyltransferase mRNA, partial cds blastn 580 182 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
8831098 8831098 PRJNA689790_S_NODE_687_length_837_cov_5.021250_g624_i0 PRJNA689790 687 837 5.02125 42.0278625 Philodinida 104783 Rotifera other_Eukaryota 979 0   NTclustered gi|402761741|gb|JX184002.1| 104786 g624 i0 87.814 90.5483870967742 837 100 99 2 2 837 481 1316 Habrotrocha constricta cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 75789 979 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
9597283 9597283 PRJNA689790_S_NODE_408_length_1153_cov_91.472222_g368_i0 PRJNA689790 408 1153 91.472222 1054.67471966 Asplanchna sp. 3231738 Rotifera other_Eukaryota 401 1.0099999999999998e-106   NTclustered gi|2778092479|gb|PP988071.1| 3231738 g368 i0 74.952 18.0728534258456 1042 177 87 75 122 1126 1413 2407 Asplanchna sp. chromosome I mitochondrion, complete sequence blastn 20838 401 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sp.
10872753 10872753 PRJNA689790_S_NODE_10429_length_184_cov_1.115646_g10314_i0 PRJNA689790 10429 184 1.115646 2.05278864 Brachionus manjavacas 667381 Rotifera other_Eukaryota 172 1.15e-38   NTclustered gi|469518290|gb|JX156222.1| 667381 g10314 i0 84.181 0.96195652173913 177 28 96 0 6 182 237 61 Brachionus manjavacas Polo-like kinase 1 (PLK1) gene, partial cds blastn 177 172 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus manjavacas
10872789 10872789 PRJNA689790_S_NODE_289_length_1533_cov_20.611631_g276_i0 PRJNA689790 289 1533 20.611631 315.97630323 Brachionus rubens 392764 Rotifera other_Eukaryota 1269 0   NTclustered gi|632795131|gb|KJ489418.1| 392764 g276 i0 82.377 46.6060013046314 1481 239 96 16 64 1533 1521 52 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 71447 1269 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
12148040 12148040 PRJNA689790_S_NODE_250_length_1805_cov_12.367647_g244_i0 PRJNA689790 250 1805 12.367647 223.23602835 Brachionus angularis 396692 Rotifera other_Eukaryota 647 1.8699999999999993e-180   NTclustered gi|1999716438|gb|MT875426.1| 396692 g244 i0 75.458 9.001108033241 1418 301 77 41 1 1393 5671 7066 Brachionus angularis chromosome II mitochondrion, complete sequence blastn 16247 647 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
12148070 12148070 PRJNA689790_S_NODE_630_length_879_cov_9.500000_g569_i0 PRJNA689790 630 879 9.5 83.505 Brachionus rubens 392764 Rotifera other_Eukaryota 370 2.15e-97   NTclustered gi|632795131|gb|KJ489418.1| 392764 g569 i0 74.858 2.24687144482366 883 189 98 27 10 873 6521 5653 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 1975 370 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
13422591 13422591 PRJNA689790_S_NODE_10251_length_185_cov_2.108108_g10136_i0 PRJNA689790 10251 185 2.108108 3.8999998 Lepadella patella 231622 Rotifera other_Eukaryota 265 1.86e-66   NTclustered gi|83285192|gb|DQ297739.1| 231622 g10136 i0 92.513 48.0702702702703 187 10 100 4 1 185 186 2 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 8893 265 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
13422607 13422607 PRJNA689790_S_NODE_14071_length_161_cov_1.435484_g13956_i0 PRJNA689790 14071 161 1.435484 2.31112924 Proales similis 360698 Rotifera other_Eukaryota 117 4.68e-22   NTclustered gi|1859640894|gb|MN970216.1| 360698 g13956 i0 87.037 1.88198757763975 108 9 66 5 56 161 8642 8746 Proales similis mitochondrion, complete genome blastn 303 117 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
13422626 13422626 PRJNA689790_S_NODE_2911_length_370_cov_2.327327_g2796_i0 PRJNA689790 2911 370 2.327327 8.6111099 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 379 1.42e-100   NTclustered gi|402761761|gb|JX184012.1| 104788 g2796 i0 85.215 23.5918918918919 372 51 100 4 1 370 590 221 Macrotrachela quadricornifera isolate CR cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 8729 379 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
13422627 13422627 PRJNA689790_S_NODE_291_length_1530_cov_15.412592_g278_i0 PRJNA689790 291 1530 15.412592 235.8126576 Asplanchna sp. 3231738 Rotifera other_Eukaryota 1192 0   NTclustered gi|2778092484|gb|PP988072.1| 3231738 g278 i0 80.934 51.7712418300654 1521 278 99 10 2 1513 44 1561 Asplanchna sp. chromosome II mitochondrion, complete sequence blastn 79210 1192 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sp.
13422639 13422639 PRJNA689790_S_NODE_451_length_1097_cov_9.443396_g408_i0 PRJNA689790 451 1097 9.443396 103.59405412 Brachionus rubens 392764 Rotifera other_Eukaryota 612 4.08e-170   NTclustered gi|632795126|gb|KJ489417.1| 392764 g408 i0 80.395 38.0938924339107 811 153 74 5 1 808 59 866 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 41789 612 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
14697711 14697711 PRJNA689790_S_NODE_9192_length_195_cov_2.139241_g9077_i0 PRJNA689790 9192 195 2.139241 4.17151995 Habrotrocha constricta 104786 Rotifera other_Eukaryota 178 2.66e-40   NTclustered gi|402761789|gb|JX184026.1| 104786 g9077 i0 84.021 0.994871794871795 194 22 97 7 2 190 861 1050 Habrotrocha constricta cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 194 178 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
15971421 15971421 PRJNA689790_S_NODE_11093_length_178_cov_3.851064_g10978_i0 PRJNA689790 11093 178 3.851064 6.85489392 Philodina citrina 468664 Rotifera other_Eukaryota 213 6.53e-51   NTclustered gi|407227484|emb|FR856884.1| 468664 g10978 i0 88.202 1.89887640449438 178 21 100 0 1 178 1293 1470 Philodina citrina complete mitochondrial genome blastn 338 213 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
15971475 15971475 PRJNA689790_S_NODE_5493_length_256_cov_2.292237_g5378_i0 PRJNA689790 5493 256 2.292237 5.86812672 Philodina roseola 96448 Rotifera other_Eukaryota 167 7.969999999999999e-37   NTclustered gi|187936090|gb|EU652318.1| 96448 g5378 i0 84.302 4.64453125 172 25 66 2 80 249 5502 5673 Philodina roseola 7TM protein 66, histone H4, histone H3, histone H2B, osteopetrosis associated transmembrane protein, cleft lip and palate associated transmembrane protein, ribosomal protein s15a, hypothetical protein 20, START domain containing protein, filament protein, hypothetical protein 21, putative GPCR, and hypothetical protein 22 genes, complete cds blastn 1189 167 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
17246634 17246634 PRJNA689790_S_NODE_3234_length_347_cov_21.893548_g3119_i0 PRJNA689790 3234 347 21.893548 75.97061156 Philodina citrina 468664 Rotifera other_Eukaryota 446 1.29e-120   NTclustered gi|407227484|emb|FR856884.1| 468664 g3119 i0 91.437 4.64841498559078 327 24 94 3 2 326 2075 2399 Philodina citrina complete mitochondrial genome blastn 1613 446 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
17246645 17246645 PRJNA689790_S_NODE_5594_length_253_cov_19.138889_g5479_i0 PRJNA689790 5594 253 19.138889 48.42138917 Philodina citrina 468664 Rotifera other_Eukaryota 329 9.469999999999998e-86   NTclustered gi|407227484|emb|FR856884.1| 468664 g5479 i0 93.333 38.9683794466403 225 12 88 3 2 224 2098 1875 Philodina citrina complete mitochondrial genome blastn 9859 329 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
19795638 19795638 PRJNA689790_S_NODE_13796_length_162_cov_1.872000_g13681_i0 PRJNA689790 13796 162 1.872 3.03264 Philodina roseola 96448 Rotifera other_Eukaryota 239 9.64e-59   NTclustered gi|183178937|gb|EU432547.1| 96448 g13681 i0 93.21 6.0679012345679 162 11 100 0 1 162 30351 30190 Philodina roseola TAR protein gene, partial cds; U1-like Zn-finger-containing protein (U1Zn_1), unknown (PruORF0001_1), unknown (PrPCG0001_1), methione sulfide reductase B (MSRB_1), Strabismus, serine-threonin kinase copy 1, plasma membrane calcium-dependent ATPase (CAse_1), myosin essential light chain (MELC_1), and 82 kDa heat shock protein (hsp82_1) genes, complete cds; FBoxLRR_1 gene, complete sequence; and TPRA_1 (TPRA_1) gene, complete cds blastn 983 239 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
22346124 22346124 PRJNA689790_S_NODE_7978_length_209_cov_2.069767_g7863_i0 PRJNA689790 7978 209 2.069767 4.32581303 Lecane elsa 360663 Rotifera other_Eukaryota 342 9.709999999999999e-90   NTclustered gi|83285087|gb|DQ297699.1| 360663 g7863 i0 96.172 100.004784688995 209 8 100 0 1 209 282 74 Lecane elsa 18S ribosomal RNA gene, partial sequence blastn 20901 342 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane elsa
23621561 23621561 PRJNA689790_S_NODE_10619_length_182_cov_1.848276_g10504_i0 PRJNA689790 10619 182 1.848276 3.36386232 Asplanchna sp. 3231738 Rotifera other_Eukaryota 165 1.91e-36   NTclustered gi|2778092479|gb|PP988071.1| 3231738 g10504 i0 84.94 6.03846153846154 166 21 90 4 1 164 6157 5994 Asplanchna sp. chromosome I mitochondrion, complete sequence blastn 1099 165 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sp.
23621615 23621615 PRJNA689790_S_NODE_4619_length_282_cov_3.008163_g4504_i0 PRJNA689790 4619 282 3.008163 8.48301966 Philodina flaviceps 408863 Rotifera other_Eukaryota 385 2.26e-102   NTclustered gi|117556764|gb|DQ890109.1| 408863 g4504 i0 91.429 98.1737588652482 280 24 99 0 3 282 336 57 Philodina flaviceps isolate dV1a cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 27685 385 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina flaviceps

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;