RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA689790" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA689790 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8321886 8321886 PRJNA689790_S_NODE_5127_length_266_cov_1.694323_g5012_i0 PRJNA689790 5127 266 1.694323 4.50689918 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 285 2.2e-72   NTclustered gi|290972772|ref|XM_002669079.1| 5762 g5012 i0 86.038 0.996240601503759 265 37 99 0 2 266 49 313 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_54415), partial mRNA blastn 265 285 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9597293 9597293 PRJNA689790_S_NODE_5728_length_250_cov_2.009390_g5613_i0 PRJNA689790 5728 250 2.00939 5.023475 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 322 1.56e-83   NTclustered gi|290976731|ref|XM_002671047.1| 5762 g5613 i0 89.96 0.996 249 25 99 0 1 249 384 136 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_73871), partial mRNA blastn 249 322 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12148033 12148033 PRJNA689790_S_NODE_16390_length_152_cov_1.017391_g16275_i0 PRJNA689790 16390 152 1.017391 1.54643432 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 241 2.47e-59   NTclustered gi|290972987|ref|XM_002669186.1| 5762 g16275 i0 95.946 1.97368421052632 148 6 97 0 5 152 985 838 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56405), mRNA blastn 300 241 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21071142 21071142 PRJNA689790_S_NODE_14557_length_159_cov_1.139344_g14442_i0 PRJNA689790 14557 159 1.139344 1.81155696 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 267 4.3199999999999996e-67   NTclustered gi|290988433|ref|XM_002676880.1| 5762 g14442 i0 96.855 9.49685534591195 159 5 100 0 1 159 711 553 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82621), mRNA blastn 1510 267 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;