RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA689790" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA689790 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17755999 17755999 PRJNA689790_S_NODE_16894_length_150_cov_1.336283_g16779_i0 PRJNA689790 16894 150 1.336283 2.0044245 Cyanophyceae 3028117 Bacteria Bacteria 215 1.47e-51   NTclustered gi|427998918|gb|CP003607.1| 56110 g16779 i0 93.151 193.26 146 10 97 0 1 146 2199630 2199775 Oscillatoria acuminata PCC 6304, complete genome blastn 28989 217 0.990783410138249 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Oscillatoriaceae Oscillatoria Oscillatoria acuminata
24130038 24130038 PRJNA689790_S_NODE_16759_length_150_cov_2.398230_g16644_i0 PRJNA689790 16759 150 2.39823 3.597345 Microcystis 1125 Bacteria Bacteria 248 1.45e-61   NTclustered gi|1861038541|dbj|LC557454.1| 1126 g16644 i0 96.667 179.56 150 4 100 1 1 150 390 538 Microcystis aeruginosa NIES-1062 gene for 23S rRNA, partial sequence blastn 26934 250 0.992 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis aeruginosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;