RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA689790" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA689790 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12657544 12657544 PRJNA689790_S_NODE_5750_length_249_cov_20.306604_g5635_i0 PRJNA689790 5750 249 20.306604 50.56344396 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 196 9.84e-46   NTclustered gi|88792583|gb|DQ386164.1| 372086 g5635 i0 88.82 64.714859437751 161 17 65 1 1 161 2695 2854 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 16114 196 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
14697701 14697701 PRJNA689790_S_NODE_7092_length_222_cov_15.691892_g6977_i0 PRJNA689790 7092 222 15.691892 34.83600024 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 215 2.37e-51   NTclustered gi|1389527545|dbj|LC383945.1| 1928728 g6977 i0 88.268 76.1846846846847 179 21 81 0 5 183 409 231 Paulinella micropora gene for actin, complete cds blastn 16913 215 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;