RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA689790" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA689790 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4496755 4496755 PRJNA689790_S_NODE_1464_length_547_cov_6.364706_g1363_i0 PRJNA689790 1464 547 6.364706 34.81494182 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 272 3.7899999999999986e-68   NTclustered gi|1931715631|ref|XM_037634414.1| 54757 g1363 i0 78.085 12.8372943327239 470 75 83 22 1 453 1193 735 Plasmodium vinckei vinckei heat shock protein 90, putative (PVVCY_1000740), partial mRNA blastn 7022 272 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
5772339 5772339 PRJNA689790_S_NODE_5325_length_261_cov_1.392857_g5210_i0 PRJNA689790 5325 261 1.392857 3.63535677 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 250 7.86e-62   NTclustered gi|1620140690|ref|XM_028676122.1| 85471 g5210 i0 84.436 23.0689655172414 257 36 98 4 7 261 611 357 Plasmodium relictum tubulin beta chain, putative (PRELSG_0806400), partial mRNA blastn 6021 250 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
9597309 9597309 PRJNA689790_S_NODE_7308_length_219_cov_1.500000_g7193_i0 PRJNA689790 7308 219 1.5 3.285 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.16e-4   NTclustered gi|1084916966|ref|XM_018787897.1| 647221 g7193 i0 100 2.17808219178082 32 0 15 0 84 115 454 423 Plasmodium gaboni hypothetical protein partial mRNA blastn 477 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
12148014 12148014 PRJNA689790_S_NODE_12850_length_167_cov_1.800000_g12735_i0 PRJNA689790 12850 167 1.8 3.006 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 106 1.06e-18   NTclustered gi|1620148938|ref|XM_028678329.1| 85471 g12735 i0 78.788 1.58682634730539 165 29 97 4 6 167 426 587 Plasmodium relictum protein transport protein SEC61 subunit alpha, putative (SEC61), partial mRNA blastn 265 106 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
13422633 13422633 PRJNA689790_S_NODE_4011_length_306_cov_2.591078_g3896_i0 PRJNA689790 4011 306 2.591078 7.92869868 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 200 9.63e-47   NTclustered gi|1673123994|ref|XM_029360740.1| 94643 g3896 i0 84.314 33.7875816993464 204 32 67 0 1 204 175 378 Besnoitia besnoiti ribosomal-ubiquitin protein RPL40 (BESB_020310), partial mRNA blastn 10339 200 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
17246653 17246653 PRJNA689790_S_NODE_7154_length_221_cov_3.581522_g7039_i0 PRJNA689790 7154 221 3.581522 7.91516362 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 132 2.45e-26   NTclustered gi|1270519053|ref|XM_022955474.1| 5861 g7039 i0 80.925 9.45701357466063 173 27 77 5 25 194 400 569 Plasmodium yoelii receptor for activated c kinase, putative (PY17X_0704200), partial mRNA blastn 2090 132 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
19795687 19795687 PRJNA689790_S_NODE_7396_length_217_cov_2.777778_g7281_i0 PRJNA689790 7396 217 2.777778 6.02777826 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 154 5.11e-33   NTclustered gi|916427472|ref|XM_013379513.1| 5802 g7281 i0 80 6.3963133640553 215 37 99 2 1 215 299 507 Eimeria tenella uncharacterized protein (ETH_00000210), partial mRNA blastn 1388 154 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;