RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA689790" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA689790 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4496786 4496786 PRJNA689790_S_NODE_5284_length_262_cov_1.368889_g5169_i0 PRJNA689790 5284 262 1.368889 3.58648918 Thecamonas trahens 529818 Root_unresolved Root_unresolved 163 1.06e-35   NTclustered gi|923129792|ref|XM_013902908.1| 461836 g5169 i0 80.269 13.8282442748092 223 38 84 5 1 220 209 428 Thecamonas trahens ATCC 50062 Ras-like C3 botulinum toxin substrate 1 (AMSG_04690), mRNA blastn 3623 163 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
4496811 4496811 PRJNA689790_S_NODE_8724_length_200_cov_1.435583_g8609_i0 PRJNA689790 8724 200 1.435583 2.871166 Thecamonas trahens 529818 Root_unresolved Root_unresolved 93.5 1.02e-14   NTclustered gi|923138884|ref|XM_013907453.1| 461836 g8609 i0 76.757 3.705 185 32 91 9 18 198 878 701 Thecamonas trahens ATCC 50062 elongation factor 2 (AMSG_00036), mRNA blastn 741 93.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5772282 5772282 PRJNA689790_S_NODE_1145_length_624_cov_5.143101_g1052_i0 PRJNA689790 1145 624 5.143101 32.09295024 Thecamonas trahens 529818 Root_unresolved Root_unresolved 483 1.8499999999999996e-131   NTclustered gi|923129792|ref|XM_013902908.1| 461836 g1052 i0 83.716 55.8814102564103 522 73 83 8 109 624 545 30 Thecamonas trahens ATCC 50062 Ras-like C3 botulinum toxin substrate 1 (AMSG_04690), mRNA blastn 34870 483 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12148004 12148004 PRJNA689790_S_NODE_10070_length_187_cov_1.173333_g9955_i0 PRJNA689790 10070 187 1.173333 2.19413271 Thecamonas trahens 529818 Root_unresolved Root_unresolved 241 3.18e-59   NTclustered gi|923138884|ref|XM_013907453.1| 461836 g9955 i0 91.429 44.475935828877 175 15 94 0 2 176 502 328 Thecamonas trahens ATCC 50062 elongation factor 2 (AMSG_00036), mRNA blastn 8317 241 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12148061 12148061 PRJNA689790_S_NODE_5010_length_270_cov_1.927039_g4895_i0 PRJNA689790 5010 270 1.927039 5.2030053 Thecamonas trahens 529818 Root_unresolved Root_unresolved 143 1.43e-29   NTclustered gi|923138884|ref|XM_013907453.1| 461836 g4895 i0 78.873 0.788888888888889 213 43 79 2 53 264 945 1156 Thecamonas trahens ATCC 50062 elongation factor 2 (AMSG_00036), mRNA blastn 213 143 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12148077 12148077 PRJNA689790_S_NODE_7890_length_210_cov_2.589595_g7775_i0 PRJNA689790 7890 210 2.589595 5.4381495 Amastigomonas marina 234594 Root_unresolved Root_unresolved 172 1.36e-38   NTclustered gi|31982973|gb|AY236711.1| 234594 g7775 i0 84.153 95.852380952381 183 23 86 4 1 180 1480 1659 Amastigomonas marina heat shock protein 90 (Hsp90) gene, partial cds blastn 20129 172 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Amastigomonas Amastigomonas marina
12148081 12148081 PRJNA689790_S_NODE_8810_length_199_cov_1.654321_g8695_i0 PRJNA689790 8810 199 1.654321 3.29209879 Thecamonas trahens 529818 Root_unresolved Root_unresolved 200 5.829999999999999e-47   NTclustered gi|923120664|ref|XM_013898350.1| 461836 g8695 i0 85 98.5075376884422 200 26 99 4 1 198 1035 1232 Thecamonas trahens ATCC 50062 ATP-dependent RNA helicase eIF4A (AMSG_10343), partial mRNA blastn 19603 200 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;