contig_metadata
23 rows where analysis = "blastn", bioproject = "PRJNA688931" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 668528 | 668528 | PRJNA688931_P_NODE_33321_length_174_cov_1.664000_g33108_i0 | PRJNA688931 | 33321 | 174 | 1.664 | 2.89536 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 237 | 3.77e-58 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g33108 | i0 | 94.194 | 68.4885057471264 | 155 | 9 | 89 | 0 | 2 | 156 | 28190 | 28344 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 11917 | 237 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 1944505 | 1944505 | PRJNA688931_P_NODE_26422_length_198_cov_2.087248_g26209_i0 | PRJNA688931 | 26422 | 198 | 2.087248 | 4.13275104 | Haloferula helveola | 490095 | Bacteria | Bacteria | 165 | 2.11e-36 | NTclustered | gi|2647781590|dbj|AP024702.1| | 490095 | g26209 | i0 | 82.234 | 16.5 | 197 | 29 | 99 | 4 | 2 | 198 | 774711 | 774901 | Haloferula helveola CN-1 DNA, complete genome | blastn | 3267 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Haloferula | Haloferula helveola | |
| 4496428 | 4496428 | PRJNA688931_P_NODE_12644_length_293_cov_1.266393_g12431_i0 | PRJNA688931 | 12644 | 293 | 1.266393 | 3.71053149 | Luteolibacter ambystomatis | 2824561 | Bacteria | Bacteria | 250 | 8.98e-62 | NTclustered | gi|2029343589|gb|CP073100.1| | 2824561 | g12431 | i0 | 82.313 | 383.941979522184 | 294 | 46 | 100 | 4 | 1 | 293 | 276714 | 276426 | Luteolibacter ambystomatis strain 32A chromosome, complete genome | blastn | 112495 | 250 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter ambystomatis | |
| 4496587 | 4496587 | PRJNA688931_P_NODE_33164_length_175_cov_1.222222_g32951_i0 | PRJNA688931 | 33164 | 175 | 1.222222 | 2.1388885 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 278 | 2.23e-70 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g32951 | i0 | 95.455 | 212.822857142857 | 176 | 5 | 100 | 3 | 1 | 175 | 2294 | 2467 | Luteolibacter sp. SL250 chromosome | blastn | 37244 | 278 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 7047147 | 7047147 | PRJNA688931_P_NODE_32886_length_176_cov_1.047244_g32673_i0 | PRJNA688931 | 32886 | 176 | 1.047244 | 1.84314944 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 298 | 1.73e-76 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g32673 | i0 | 97.159 | 9.64772727272727 | 176 | 5 | 100 | 0 | 1 | 176 | 1316284 | 1316109 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 1698 | 298 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 8321545 | 8321545 | PRJNA688931_P_NODE_15547_length_261_cov_2.009434_g15334_i0 | PRJNA688931 | 15547 | 261 | 2.009434 | 5.24462274 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 351 | 2.1e-92 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g15334 | i0 | 90.909 | 118.83908045977 | 264 | 21 | 100 | 3 | 1 | 261 | 3833329 | 3833592 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 31017 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 8321567 | 8321567 | PRJNA688931_P_NODE_18247_length_240_cov_1.586387_g18034_i0 | PRJNA688931 | 18247 | 240 | 1.586387 | 3.8073288 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 337 | 5.32e-88 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g18034 | i0 | 94.884 | 14.15 | 215 | 11 | 90 | 0 | 26 | 240 | 1316374 | 1316160 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 3396 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 9596956 | 9596956 | PRJNA688931_P_NODE_16108_length_256_cov_1.724638_g15895_i0 | PRJNA688931 | 16108 | 256 | 1.724638 | 4.41507328 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 361 | 3.4e-95 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g15895 | i0 | 92.157 | 169.19140625 | 255 | 20 | 99 | 0 | 2 | 256 | 5152562 | 5152308 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 43313 | 361 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 9596964 | 9596964 | PRJNA688931_P_NODE_17288_length_247_cov_1.156566_g17075_i0 | PRJNA688931 | 17288 | 247 | 1.156566 | 2.85671802 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 337 | 5.5e-88 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g17075 | i0 | 91.498 | 242.392712550607 | 247 | 18 | 100 | 3 | 1 | 247 | 1317034 | 1317277 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 59871 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10106774 | 10106774 | PRJNA688931_P_NODE_7888_length_384_cov_1.588060_g7675_i0 | PRJNA688931 | 7888 | 384 | 1.58806 | 6.0981504 | Verrucomicrobiaceae | 203557 | Bacteria | Bacteria | 579 | 1.3599999999999996e-160 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g7675 | i0 | 93.995 | 277.3359375 | 383 | 21 | 99 | 2 | 1 | 382 | 2624 | 2243 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 106497 | 579 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 12147892 | 12147892 | PRJNA688931_P_NODE_3690_length_585_cov_1.886194_g3492_i0 | PRJNA688931 | 3690 | 585 | 1.886194 | 11.0342349 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 904 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g3492 | i0 | 95.288 | 179.682051282051 | 573 | 22 | 97 | 5 | 17 | 585 | 1315262 | 1315833 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 105114 | 904 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 13422488 | 13422488 | PRJNA688931_P_NODE_39111_length_165_cov_1.784483_g38898_i0 | PRJNA688931 | 39111 | 165 | 1.784483 | 2.94439695 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 267 | 4.53e-67 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g38898 | i0 | 95.758 | 36.4060606060606 | 165 | 7 | 100 | 0 | 1 | 165 | 1404510 | 1404346 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 6007 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 14697442 | 14697442 | PRJNA688931_P_NODE_27912_length_193_cov_1.027778_g27699_i0 | PRJNA688931 | 27912 | 193 | 1.027778 | 1.98361154 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 322 | 1.15e-83 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g27699 | i0 | 96.891 | 37.1865284974093 | 193 | 4 | 100 | 2 | 1 | 193 | 5153590 | 5153400 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 7177 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14697480 | 14697480 | PRJNA688931_P_NODE_32672_length_176_cov_1.637795_g32459_i0 | PRJNA688931 | 32672 | 176 | 1.637795 | 2.8825192 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 292 | 8.04e-75 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g32459 | i0 | 96.591 | 260.363636363636 | 176 | 6 | 100 | 0 | 1 | 176 | 1316650 | 1316825 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 45824 | 292 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14697526 | 14697526 | PRJNA688931_P_NODE_37832_length_166_cov_1.769231_g37619_i0 | PRJNA688931 | 37832 | 166 | 1.769231 | 2.93692346 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 259 | 7.63e-65 | NTclustered | gi|12583973|gb|AF245377.1| | 240016 | g37619 | i0 | 95.122 | 154.698795180723 | 164 | 8 | 99 | 0 | 3 | 166 | 2732 | 2569 | Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence | blastn | 25680 | 259 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 14697632 | 14697632 | PRJNA688931_P_NODE_8632_length_365_cov_0.977848_g8419_i0 | PRJNA688931 | 8632 | 365 | 0.977848 | 3.5691452 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 536 | 7.849999999999998e-148 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g8419 | i0 | 93.169 | 76.3041095890411 | 366 | 23 | 100 | 2 | 1 | 365 | 16665 | 16301 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 27851 | 536 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 15971163 | 15971163 | PRJNA688931_P_NODE_21213_length_222_cov_1.601156_g21000_i0 | PRJNA688931 | 21213 | 222 | 1.601156 | 3.55456632 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 303 | 4.92e-78 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g21000 | i0 | 91.441 | 289.189189189189 | 222 | 18 | 100 | 1 | 1 | 222 | 3411930 | 3412150 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 64200 | 303 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 18520593 | 18520593 | PRJNA688931_P_NODE_32235_length_178_cov_1.116279_g32022_i0 | PRJNA688931 | 32235 | 178 | 1.116279 | 1.98697662 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 252 | 1.38e-62 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g32022 | i0 | 93.491 | 114.88202247191 | 169 | 11 | 95 | 0 | 9 | 177 | 347 | 179 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 20449 | 252 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 19029750 | 19029750 | PRJNA688931_P_NODE_27935_length_192_cov_4.874126_g27722_i0 | PRJNA688931 | 27935 | 192 | 4.874126 | 9.35832192 | Luteolibacter | 518753 | Bacteria | Bacteria | 322 | 1.14e-83 | NTclustered | gi|197360304|gb|EU979092.1| | 156588 | g27722 | i0 | 96.875 | 97.5 | 192 | 6 | 100 | 0 | 1 | 192 | 196 | 5 | Uncultured Verrucomicrobia bacterium clone g83 16S ribosomal RNA gene, partial sequence | blastn | 18720 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 22345734 | 22345734 | PRJNA688931_P_NODE_12098_length_300_cov_2.231076_g11885_i0 | PRJNA688931 | 12098 | 300 | 2.231076 | 6.693228 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 342 | 1.4799999999999999e-89 | NTclustered | gi|12583973|gb|AF245377.1| | 240016 | g11885 | i0 | 90.734 | 64.2033333333333 | 259 | 21 | 86 | 3 | 1 | 257 | 437 | 180 | Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence | blastn | 19261 | 342 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 22345874 | 22345874 | PRJNA688931_P_NODE_29558_length_187_cov_1.123188_g29345_i0 | PRJNA688931 | 29558 | 187 | 1.123188 | 2.10036156 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 296 | 6.7e-76 | NTclustered | gi|12583973|gb|AF245377.1| | 240016 | g29345 | i0 | 95.187 | 278.989304812834 | 187 | 9 | 100 | 0 | 1 | 187 | 1021 | 835 | Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence | blastn | 52171 | 296 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 22346049 | 22346049 | PRJNA688931_P_NODE_9278_length_349_cov_2.510000_g9065_i0 | PRJNA688931 | 9278 | 349 | 2.51 | 8.7599 | Luteolibacter sp. LG18 | 2819286 | Bacteria | Bacteria | 568 | 2.6499999999999995e-157 | NTclustered | gi|2585939279|dbj|AP024600.1| | 2819286 | g9065 | i0 | 95.989 | 287.022922636103 | 349 | 14 | 100 | 0 | 1 | 349 | 2218344 | 2218692 | Luteolibacter sp. LG18 DNA, complete genome | blastn | 100171 | 568 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. LG18 | |
| 24894718 | 24894718 | PRJNA688931_P_NODE_31360_length_181_cov_0.818182_g31147_i0 | PRJNA688931 | 31360 | 181 | 0.818182 | 1.48090942 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 126 | 8.93e-25 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g31147 | i0 | 79.558 | 2.19889502762431 | 181 | 33 | 99 | 4 | 3 | 181 | 4461183 | 4461005 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 398 | 126 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;