RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA688931" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA688931 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3729927 3729927 PRJNA688931_P_NODE_23323_length_212_cov_1.220859_g23110_i0 PRJNA688931 23323 212 1.220859 2.58822108 Trypanosoma 5690 Euglenozoa other_Eukaryota 220 4.83e-53   NTclustered gi|2421781864|ref|XR_008254389.1| 5693 g23110 i0 88.587 100.075471698113 184 18 87 2 29 212 924 744 Trypanosoma cruzi ribosomal RNA large subunit beta, 3' partial (Tc00.1047053436429.10), partial rRNA blastn 21216 220 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
5006409 5006409 PRJNA688931_P_NODE_34804_length_170_cov_1.140496_g34591_i0 PRJNA688931 34804 170 1.140496 1.9388432 Trypanosoma 5690 Euglenozoa other_Eukaryota 237 3.6600000000000005e-58   NTclustered gi|2421780538|ref|XR_008255583.1| 5693 g34591 i0 93.168 117.876470588235 161 11 95 0 3 163 171 11 Trypanosoma cruzi ribosomal RNA large subunit delta (M2), 5' partial (Tc00.1047053509005.101), partial rRNA blastn 20039 237 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
5006429 5006429 PRJNA688931_P_NODE_43184_length_162_cov_0.920354_g42971_i0 PRJNA688931 43184 162 0.920354 1.49097348 Rhynchobodo 51333 Euglenozoa other_Eukaryota 243 7.45e-60   NTclustered gi|45739055|gb|AY490213.1| 266815 g42971 i0 93.827 100.956790123457 162 9 100 1 1 162 595 435 Rhynchobodo sp. Hamilton Lake 18S ribosomal RNA gene, partial sequence blastn 16355 244 0.995901639344262 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo sp. Hamilton Lake
5772067 5772067 PRJNA688931_P_NODE_23865_length_209_cov_1.875000_g23652_i0 PRJNA688931 23865 209 1.875 3.91875 Neobodo designis 312471 Euglenozoa other_Eukaryota 329 7.56e-86   NTclustered gi|197723537|gb|EF681922.2| 312471 g23652 i0 95.215 161.502392344498 209 9 100 1 1 209 1012 1219 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 33754 329 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
12147934 12147934 PRJNA688931_P_NODE_43170_length_162_cov_0.920354_g42957_i0 PRJNA688931 43170 162 0.920354 1.49097348 Leishmania mexicana 5665 Euglenozoa other_Eukaryota 174 2.76e-39   NTclustered gi|401416558|ref|XM_003872725.1| 929439 g42957 i0 91.935 82.1172839506173 124 10 77 0 1 124 124 1 Leishmania mexicana MHOM/GT/2001/U1103 putative calmodulin partial mRNA blastn 13303 174 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania mexicana
17246387 17246387 PRJNA688931_P_NODE_27214_length_195_cov_2.109589_g27001_i0 PRJNA688931 27214 195 2.109589 4.11369855 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 52.8 0.017   NTclustered gi|1002441866|ref|XM_015805738.1| 157538 g27001 i0 96.875 0.164102564102564 32 0 16 1 103 134 5591 5621 Leptomonas pyrrhocoris putative dynein heavy chain mRNA blastn 32 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
21070987 21070987 PRJNA688931_P_NODE_35757_length_168_cov_1.310924_g35544_i0 PRJNA688931 35757 168 1.310924 2.20235232 Monomorphina pyrum 96784 Euglenozoa other_Eukaryota 99 1.79e-16   NTclustered gi|388269856|gb|JQ398665.1| 96784 g35544 i0 79.054 1.05357142857143 148 27 87 3 13 158 814 669 Monomorphina pyrum heat shock protein 90 (hsp90) mRNA, partial cds blastn 177 99 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Monomorphina Monomorphina pyrum
22855403 22855403 PRJNA688931_P_NODE_12838_length_290_cov_2.240664_g12625_i0 PRJNA688931 12838 290 2.240664 6.4979256 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 392 1.39e-104   NTclustered gi|2593250474|emb|OY748421.1| 5660 g12625 i0 90.909 134.537931034483 297 19 100 5 1 290 990095 989800 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 39016 394 0.99492385786802 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
23621260 23621260 PRJNA688931_P_NODE_10099_length_332_cov_4.399293_g9886_i0 PRJNA688931 10099 332 4.399293 14.60565276 Trypanosoma rangeli 5698 Euglenozoa other_Eukaryota 86.1 3.08e-12   NTclustered gi|1673172107|ref|XM_029386010.1| 5698 g9886 i0 85.542 1.98493975903614 83 10 25 2 210 291 1021 940 Trypanosoma rangeli ribonucleoside-diphosphate reductase subunit M2 (TraAM80_09318), partial mRNA blastn 659 86.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
24894554 24894554 PRJNA688931_P_NODE_10920_length_318_cov_2.085502_g10707_i0 PRJNA688931 10920 318 2.085502 6.63189636 Trypanosoma brucei 5691 Euglenozoa other_Eukaryota 82.4 3.8e-11   NTclustered gi|7799314|emb|AJ400880.1| 5702 g10707 i0 91.667 1.32075471698113 60 4 19 1 232 290 792 851 Trypanosoma brucei brucei H1H76 gene for histone H1 and H1D71 gene for histone H1, strain TREU 927/4 blastn 420 82.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;