RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA688931" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA688931 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10872472 10872472 PRJNA688931_P_NODE_17849_length_243_cov_1.257732_g17636_i0 PRJNA688931 17849 243 1.257732 3.05628876 uncultured Leptophryidae 2603696 SAR_Eukaryotes SAR_Eukaryotes 368 1.91e-97   NTclustered gi|1723854072|gb|MN323080.1| 2603696 g17636 i0 98.558 94.5637860082305 208 3 86 0 23 230 321 114 Uncultured Leptophryidae clone OTU0958 small subunit ribosomal RNA gene, partial sequence blastn 22979 368 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae   uncultured Leptophryidae
24894695 24894695 PRJNA688931_P_NODE_28120_length_192_cov_1.132867_g27907_i0 PRJNA688931 28120 192 1.132867 2.17510464 Filoreta japonica 536288 SAR_Eukaryotes SAR_Eukaryotes 161 2.6299999999999997e-35   NTclustered gi|302563028|dbj|AB546337.1| 536288 g27907 i0 81.771 75.9739583333333 192 35 100 0 1 192 302 111 Cercozoa sp. DDB-2008a EF-1a mRNA for elongation factor 1alpha, partial cds blastn 14587 161 1 Eukaryota Sar   Endomyxa       Filoreta Filoreta japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;