RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA688931" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA688931 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1944682 1944682 PRJNA688931_P_NODE_5842_length_455_cov_1.689655_g5630_i0 PRJNA688931 5842 455 1.689655 7.68793025 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 58.4 0.001   NTclustered gi|916515156|ref|XM_013502136.1| 44415 g5630 i0 100 0.648351648351648 31 0 7 0 283 313 133 163 Eimeria mitis uncharacterized protein (EMH_0094770), partial mRNA blastn 295 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
5772006 5772006 PRJNA688931_P_NODE_14365_length_273_cov_1.218750_g14152_i0 PRJNA688931 14365 273 1.21875 3.3271875 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|820689624|tpe|LN714479.1| 572307 g14152 i0 94.444 0.263736263736264 36 2 13 0 1 36 481626 481591 TPA_asm: Neospora caninum Liverpool, chromosome chrV, complete genome blastn 72 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
10106717 10106717 PRJNA688931_P_NODE_27608_length_194_cov_1.317241_g27395_i0 PRJNA688931 27608 194 1.317241 2.55544754 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 111 2.72e-20   NTclustered gi|260326444|dbj|AK318056.1| 5811 g27395 i0 81.481 7.97422680412371 135 25 70 0 60 194 946 812 Toxoplasma gondii cDNA, clone: XTG05808.2, full cDNA, XTG Sugano cDNA library blastn 1547 111 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
15206671 15206671 PRJNA688931_P_NODE_22892_length_214_cov_1.224242_g22679_i0 PRJNA688931 22892 214 1.224242 2.61987788 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.019   NTclustered gi|1145262573|ref|XM_012909446.2| 5854 g22679 i0 96.875 0.672897196261682 32 0 14 1 111 141 3053 3022 Plasmodium reichenowi hypothetical protein partial mRNA blastn 144 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
15971283 15971283 PRJNA688931_P_NODE_35633_length_168_cov_1.739496_g35420_i0 PRJNA688931 35633 168 1.739496 2.92235328 Porospora cf. gigantea A 2853593 SAR_Eukaryotes SAR_Eukaryotes 65.8 1.81e-6   NTclustered gi|2794693389|ref|XM_067953077.1| 2853593 g35420 i0 93.182 0.261904761904762 44 3 26 0 27 70 146 103 MAG: Porospora cf. gigantea A uncharacterized protein (KVP18_002296), partial mRNA blastn 44 65.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Porosporidae Porospora Porospora cf. gigantea A
21070988 21070988 PRJNA688931_P_NODE_35837_length_168_cov_1.142857_g35624_i0 PRJNA688931 35837 168 1.142857 1.91999976 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|1084992818|ref|XM_018781857.1| 508771 g35624 i0 100 1.5297619047619 30 0 18 0 118 147 2692 2721 Toxoplasma gondii ME49 HEAT repeat-containing protein mRNA blastn 257 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;