RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA688931" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA688931 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5772187 5772187 PRJNA688931_P_NODE_39345_length_165_cov_1.043103_g39132_i0 PRJNA688931 39345 165 1.043103 1.72111995 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 272 9.73e-69   NTclustered gi|1799615131|gb|CP045921.1| 2665156 g39132 i0 96.364 66.7878787878788 165 6 100 0 1 165 221224 221388 Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome blastn 11020 272 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
12147854 12147854 PRJNA688931_P_NODE_32070_length_178_cov_1.589147_g31857_i0 PRJNA688931 32070 178 1.589147 2.82868166 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 180 6.62e-41   NTclustered gi|2621703606|emb|OY761465.1| 2838779 g31857 i0 85.393 80.061797752809 178 21 99 3 3 178 3394346 3394172 MAG: Candidatus Binatia bacterium isolate d3e24e22-6b5b-4867-8422-75782eed2520 genome assembly, chromosome: 1 blastn 14251 180 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
23621505 23621505 PRJNA688931_P_NODE_43379_length_162_cov_0.920354_g43166_i0 PRJNA688931 43379 162 0.920354 1.49097348 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 219 1.26e-52   NTclustered gi|2874254095|emb|OY970178.1| 2212470 g43166 i0 91.72 11.7469135802469 157 13 97 0 6 162 1426922 1426766 MAG: Candidatus Eisenbacteria bacterium isolate MFD05942.bin.c.1 genome assembly, chromosome: 1 blastn 1903 219 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
24894700 24894700 PRJNA688931_P_NODE_28660_length_190_cov_1.304965_g28447_i0 PRJNA688931 28660 190 1.304965 2.4794335 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 76.8 9.69e-10   NTclustered gi|2258832001|gb|CP060225.1| 2053688 g28447 i0 82.105 2.7 95 11 49 6 2 94 628408 628318 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-9 chromosome, complete genome blastn 513 76.8 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;