RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA688931" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA688931 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9596969 9596969 PRJNA688931_P_NODE_18168_length_241_cov_0.911458_g17955_i0 PRJNA688931 18168 241 0.911458 2.19661378 Thecamonas trahens 529818 Root_unresolved Root_unresolved 60.2 1.3e-4   NTclustered gi|923119163|ref|XM_013897602.1| 461836 g17955 i0 94.872 0.70954356846473 39 1 16 1 35 72 883 921 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_10984), partial mRNA blastn 171 60.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
9596993 9596993 PRJNA688931_P_NODE_21408_length_221_cov_1.784884_g21195_i0 PRJNA688931 21408 221 1.784884 3.94459364 Thecamonas trahens 529818 Root_unresolved Root_unresolved 67.6 7e-7   NTclustered gi|923122360|ref|XM_013899196.1| 461836 g21195 i0 97.436 9.28054298642534 39 1 18 0 9 47 350 388 Thecamonas trahens ATCC 50062 MYB family transcription factor (AMSG_09258), mRNA blastn 2051 67.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;