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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA688931" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 15 ✖

bioproject 1

  • PRJNA688931 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
668450 668450 PRJNA688931_P_NODE_20141_length_228_cov_1.413408_g19928_i0 PRJNA688931 20141 228 1.413408 3.22257024 Cavenderia fasciculata 261658 Evosea other_Eukaryota 176 1.16e-39   NTclustered gi|470241101|ref|XM_004352074.1| 261658 g19928 i0 87.919 70.2456140350877 149 18 65 0 80 228 2483 2335 Cavenderia fasciculata RNA polymerase II largest subunit (rpb1), partial mRNA blastn 16016 176 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
3219353 3219353 PRJNA688931_P_NODE_28723_length_190_cov_1.092199_g28510_i0 PRJNA688931 28723 190 1.092199 2.0751781 Spumochlamys bryora 675832 Tubulinea other_Eukaryota 346 6.690000000000001e-91   NTclustered gi|259595677|gb|FJ705341.1| 675832 g28510 i0 99.474 6.02631578947368 190 1 100 0 1 190 993 1182 Spumochlamys bryora clone 1901 18S ribosomal RNA gene, partial sequence blastn 1145 346 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys bryora
7047149 7047149 PRJNA688931_P_NODE_32946_length_175_cov_2.214286_g32733_i0 PRJNA688931 32946 175 2.214286 3.8750005 Acytostelium subglobosum 361139 Evosea other_Eukaryota 115 1.85e-21   NTclustered gi|831756695|ref|XM_012893348.1| 1410327 g32733 i0 80.667 0.857142857142857 150 27 85 2 3 151 182 34 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 150 115 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
8321685 8321685 PRJNA688931_P_NODE_34767_length_170_cov_1.272727_g34554_i0 PRJNA688931 34767 170 1.272727 2.1636359 Acytostelium subglobosum 361139 Evosea other_Eukaryota 84.2 5.04e-12   NTclustered gi|831776054|ref|XM_012899232.1| 1410327 g34554 i0 82.796 0.729411764705882 93 16 55 0 10 102 1161 1253 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 124 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
10872573 10872573 PRJNA688931_P_NODE_30249_length_184_cov_1.903704_g30036_i0 PRJNA688931 30249 184 1.903704 3.50281536 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 156 1.16e-33   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g30036 i0 83.529 6.34782608695652 170 24 91 3 17 184 1052 885 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 1168 156 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12147734 12147734 PRJNA688931_P_NODE_15890_length_258_cov_1.923445_g15677_i0 PRJNA688931 15890 258 1.923445 4.9624881 Acytostelium subglobosum 361139 Evosea other_Eukaryota 128 3.79e-25   NTclustered gi|831792076|ref|XM_012904471.1| 1410327 g15677 i0 86.066 0.89922480620155 122 13 47 2 1 120 1524 1643 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 232 128 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
13422587 13422587 PRJNA688931_P_NODE_9531_length_344_cov_1.525424_g9318_i0 PRJNA688931 9531 344 1.525424 5.24745856 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 303 8.14e-78   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g9318 i0 82.899 49.9011627906977 345 51 99 6 2 342 2384 2044 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 17166 303 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15971213 15971213 PRJNA688931_P_NODE_27493_length_194_cov_1.779310_g27280_i0 PRJNA688931 27493 194 1.77931 3.4518614 Heterostelium album 2086695 Evosea other_Eukaryota 54.7 0.005   NTclustered gi|1160560456|ref|XM_020578332.1| 670386 g27280 i0 96.875 0.164948453608247 32 1 16 0 78 109 1361 1330 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 32 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
17246490 17246490 PRJNA688931_P_NODE_40354_length_164_cov_1.721739_g40141_i0 PRJNA688931 40354 164 1.721739 2.82365196 Ripella platypodia 2047821 Discosea other_Eukaryota 259 7.52e-65   NTclustered gi|1269228348|gb|MF683473.1| 2047821 g40141 i0 95.181 101.640243902439 166 4 100 3 1 164 1307 1144 Ripella platypodia clone 21702 18S ribosomal RNA gene, partial sequence blastn 16669 259 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
18520501 18520501 PRJNA688931_P_NODE_19555_length_231_cov_3.021978_g19342_i0 PRJNA688931 19555 231 3.021978 6.98076918 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 115 2.6e-21   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g19342 i0 89.13 38.8614718614719 92 10 40 0 2 93 212 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 8977 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18520509 18520509 PRJNA688931_P_NODE_2155_length_774_cov_3.936552_g1995_i0 PRJNA688931 2155 774 3.936552 30.46891248 Ripella sp. GP2 1217115 Discosea other_Eukaryota 846 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g1995 i0 93.448 72.4896640826873 580 23 74 11 200 774 1 570 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 56107 846 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
19795298 19795298 PRJNA688931_P_NODE_12956_length_289_cov_1.466667_g12743_i0 PRJNA688931 12956 289 1.466667 4.23866763 Ripella sp. GP2 1217115 Discosea other_Eukaryota 440 4.889999999999998e-119   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g12743 i0 97.308 79.6643598615917 260 5 90 1 1 260 675 932 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 23023 440 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
19795383 19795383 PRJNA688931_P_NODE_23696_length_210_cov_1.354037_g23483_i0 PRJNA688931 23696 210 1.354037 2.8434777 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 215 2.22e-51   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g23483 i0 88.268 84.3 179 21 85 0 32 210 362 184 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 17703 215 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24894749 24894749 PRJNA688931_P_NODE_35600_length_168_cov_1.949580_g35387_i0 PRJNA688931 35600 168 1.94958 3.2752944 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 3.03e-4   NTclustered gi|470492282|ref|XM_004345943.1| 1257118 g35387 i0 100 0.351190476190476 31 0 18 0 37 67 721 691 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_183950), partial mRNA blastn 59 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24894859 24894859 PRJNA688931_P_NODE_6380_length_433_cov_2.067708_g6167_i0 PRJNA688931 6380 433 2.067708 8.95317564 Acytostelium subglobosum 361139 Evosea other_Eukaryota 54.7 0.012   NTclustered gi|831783851|ref|XM_012901808.1| 1410327 g6167 i0 96.875 0.0739030023094688 32 1 7 0 257 288 146 115 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 32 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;