RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA688736" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688736 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7046975 7046975 PRJNA688736_P_NODE_9766_length_478_cov_2.698765_g9482_i0 PRJNA688736 9766 478 2.698765 12.9000967 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 307 9e-79   NTclustered gi|2037969611|ref|XM_041596785.1| 7654 g9482 i0 79.812 91.4309623430962 426 82 89 4 15 438 578 155 PREDICTED: Lytechinus variegatus 60S ribosomal protein L10a-like (LOC121405821), mRNA blastn 43704 307 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
10105823 10105823 PRJNA688736_P_NODE_19208_length_354_cov_2.494662_g18923_i0 PRJNA688736 19208 354 2.494662 8.83110348 Metazoa 33208 Echinodermata other_Eukaryota 337 8.249999999999998e-88   NTclustered gi|1944932336|ref|XM_038221755.1| 46514 g18923 i0 87.372 83.3446327683616 293 37 83 0 1 293 471 179 PREDICTED: Patiria miniata tubulin alpha-1A chain-like (LOC119745423), transcript variant X1, mRNA blastn 29504 337 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;