contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA688736" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3218581 | 3218581 | PRJNA688736_P_NODE_27743_length_303_cov_1.147826_g27458_i0 | PRJNA688736 | 27743 | 303 | 1.147826 | 3.47791278 | Companilactobacillus allii | 1847728 | Bacteria | Bacteria | 542 | 1.37e-149 | NTclustered | gi|1134955820|gb|CP019323.1| | 1847728 | g27458 | i0 | 99.007 | 471.590759075908 | 302 | 3 | 99 | 0 | 2 | 303 | 647993 | 647692 | Companilactobacillus allii strain WiKim39, complete sequence. | blastn | 142892 | 542 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Companilactobacillus | Companilactobacillus allii | ||
| 5006024 | 5006024 | PRJNA688736_P_NODE_38424_length_257_cov_3.190217_g38139_i0 | PRJNA688736 | 38424 | 257 | 3.190217 | 8.19885769 | Limosilactobacillus | 2742598 | Bacteria | Bacteria | 475 | 1.1699999999999999e-129 | NTclustered | gi|2316373968|gb|CP106884.1| | 1633 | g38139 | i0 | 100 | 486.241245136187 | 257 | 0 | 100 | 0 | 1 | 257 | 501524 | 501268 | Limosilactobacillus vaginalis strain GSH01 chromosome, complete genome | blastn | 124964 | 475 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Limosilactobacillus | Limosilactobacillus vaginalis | ||
| 5771592 | 5771592 | PRJNA688736_P_NODE_40185_length_253_cov_0.866667_g39900_i0 | PRJNA688736 | 40185 | 253 | 0.866667 | 2.19266751 | Staphylococcus shinii | 2912228 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|1969348917|gb|CP068712.1| | 2912228 | g39900 | i0 | 100 | 55.8300395256917 | 253 | 0 | 100 | 0 | 1 | 253 | 1512374 | 1512122 | Staphylococcus shinii strain 14AME19 chromosome, complete genome | blastn | 14125 | 468 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus shinii | ||
| 7046391 | 7046391 | PRJNA688736_P_NODE_32366_length_282_cov_1.416268_g32081_i0 | PRJNA688736 | 32366 | 282 | 1.416268 | 3.99387576 | Lapidilactobacillus dextrinicus | 51664 | Bacteria | Bacteria | 420 | 6.19e-113 | NTclustered | gi|1757085258|gb|CP044499.1| | 51664 | g32081 | i0 | 93.38 | 447.822695035461 | 287 | 14 | 100 | 3 | 1 | 282 | 191060 | 191346 | Lapidilactobacillus dextrinicus strain LH506 chromosome, complete genome | blastn | 126286 | 420 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lapidilactobacillus | Lapidilactobacillus dextrinicus | ||
| 7555986 | 7555986 | PRJNA688736_P_NODE_9926_length_474_cov_3.633416_g9642_i0 | PRJNA688736 | 9926 | 474 | 3.633416 | 17.22239184 | Lactiplantibacillus | 2767842 | Bacteria | Bacteria | 869 | 0 | NTclustered | gi|2739944818|emb|OZ061355.1| | 1589 | g9642 | i0 | 99.789 | 478.042194092827 | 473 | 1 | 99 | 0 | 1 | 473 | 568105 | 568577 | Lactiplantibacillus pentosus isolate Lactiplantibacillus pentosus CNRZ1547 genome assembly, chromosome: 1 | blastn | 226592 | 869 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus pentosus | ||
| 8830599 | 8830599 | PRJNA688736_P_NODE_38027_length_259_cov_1.446237_g37742_i0 | PRJNA688736 | 38027 | 259 | 1.446237 | 3.74575383 | Bacilli | 91061 | Bacteria | Bacteria | 462 | 9.2e-126 | NTclustered | gi|1114444147|gb|KX057511.1| | 1428 | g37742 | i0 | 98.842 | 110 | 259 | 3 | 100 | 0 | 1 | 259 | 749 | 491 | Bacillus thuringiensis strain a33 16S ribosomal RNA gene, partial sequence | blastn | 28490 | 462 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus thuringiensis | ||
| 11380950 | 11380950 | PRJNA688736_P_NODE_30989_length_288_cov_1.134884_g30704_i0 | PRJNA688736 | 30989 | 288 | 1.134884 | 3.26846592 | Geobacillus | 129337 | Bacteria | Bacteria | 516 | 7.86e-142 | NTclustered | gi|1317793375|gb|CP025074.1| | 1394 | g30704 | i0 | 98.958 | 35 | 288 | 3 | 100 | 0 | 1 | 288 | 251489 | 251776 | [Bacillus] caldolyticus strain NEB414 chromosome, complete genome | blastn | 10080 | 521 | 0.990403071017274 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | [Bacillus] caldolyticus | ||
| 12656654 | 12656654 | PRJNA688736_P_NODE_20350_length_346_cov_1.315018_g20065_i0 | PRJNA688736 | 20350 | 346 | 1.315018 | 4.54996228 | Staphylococcus | 1279 | Bacteria | Bacteria | 634 | 2.5599999999999996e-177 | NTclustered | gi|93463980|gb|DQ472009.1| | 1288 | g20065 | i0 | 99.711 | 517.028901734104 | 346 | 1 | 100 | 0 | 1 | 346 | 1125 | 1470 | Staphylococcus xylosus strain DSM20267 23S ribosomal RNA gene, partial sequence | blastn | 178892 | 634 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus xylosus | ||
| 13931038 | 13931038 | PRJNA688736_P_NODE_13671_length_411_cov_2.952663_g13386_i0 | PRJNA688736 | 13671 | 411 | 2.952663 | 12.13544493 | Lactiplantibacillus | 2767842 | Bacteria | Bacteria | 745 | 0 | NTclustered | gi|1482711233|gb|CP032460.1| | 1590 | g13386 | i0 | 99.511 | 472.729927007299 | 409 | 2 | 99 | 0 | 1 | 409 | 1181972 | 1182380 | Lactiplantibacillus plantarum strain ATG-K2 chromosome, complete genome | blastn | 194292 | 745 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 14696804 | 14696804 | PRJNA688736_P_NODE_36992_length_263_cov_1.257895_g36707_i0 | PRJNA688736 | 36992 | 263 | 1.257895 | 3.30826385 | Lysinibacillus sp. PLM2 | 2929796 | Bacteria | Bacteria | 383 | 7.499999999999999e-102 | NTclustered | gi|2215597311|dbj|AP025689.1| | 2929796 | g36707 | i0 | 92.83 | 1.00760456273764 | 265 | 17 | 100 | 1 | 1 | 263 | 3812472 | 3812736 | Lysinibacillus sp. PLM2 DNA, complete genome | blastn | 265 | 383 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Lysinibacillus | Lysinibacillus sp. PLM2 | ||
| 15205872 | 15205872 | PRJNA688736_P_NODE_19792_length_350_cov_1.440433_g19507_i0 | PRJNA688736 | 19792 | 350 | 1.440433 | 5.0415155 | Lactiplantibacillus | 2767842 | Bacteria | Bacteria | 641 | 1.5399999999999996e-179 | NTclustered | gi|2739944818|emb|OZ061355.1| | 1589 | g19507 | i0 | 99.714 | 471.048571428571 | 350 | 1 | 100 | 0 | 1 | 350 | 567258 | 567607 | Lactiplantibacillus pentosus isolate Lactiplantibacillus pentosus CNRZ1547 genome assembly, chromosome: 1 | blastn | 164867 | 641 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus pentosus | ||
| 15971003 | 15971003 | PRJNA688736_P_NODE_6913_length_558_cov_3.746392_g6631_i0 | PRJNA688736 | 6913 | 558 | 3.746392 | 20.90486736 | Lapidilactobacillus dextrinicus | 51664 | Bacteria | Bacteria | 928 | 0 | NTclustered | gi|1757085258|gb|CP044499.1| | 51664 | g6631 | i0 | 96.926 | 571.965949820789 | 553 | 17 | 99 | 0 | 1 | 553 | 191971 | 192523 | Lapidilactobacillus dextrinicus strain LH506 chromosome, complete genome | blastn | 319157 | 928 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lapidilactobacillus | Lapidilactobacillus dextrinicus | ||
| 16480551 | 16480551 | PRJNA688736_P_NODE_39653_length_253_cov_1.577778_g39368_i0 | PRJNA688736 | 39653 | 253 | 1.577778 | 3.99177834 | Companilactobacillus | 2767879 | Bacteria | Bacteria | 431 | 2.52e-116 | NTclustered | gi|1678291493|gb|CP040736.1| | 938155 | g39368 | i0 | 97.61 | 537.529644268775 | 251 | 6 | 99 | 0 | 1 | 251 | 34481 | 34231 | Companilactobacillus futsaii strain Y97 chromosome, complete genome | blastn | 135995 | 431 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Companilactobacillus | Companilactobacillus futsaii | ||
| 20304015 | 20304015 | PRJNA688736_P_NODE_37416_length_261_cov_2.234043_g37131_i0 | PRJNA688736 | 37416 | 261 | 2.234043 | 5.83085223 | Companilactobacillus | 2767879 | Bacteria | Bacteria | 449 | 7.22e-122 | NTclustered | gi|2781060683|gb|CP162899.1| | 1612 | g37131 | i0 | 97.701 | 521.195402298851 | 261 | 6 | 100 | 0 | 1 | 261 | 1879594 | 1879334 | Companilactobacillus farciminis strain YLR-1 chromosome, complete genome | blastn | 136032 | 449 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Companilactobacillus | Companilactobacillus farciminis | ||
| 21579645 | 21579645 | PRJNA688736_P_NODE_27857_length_302_cov_1.388646_g27572_i0 | PRJNA688736 | 27857 | 302 | 1.388646 | 4.19371092 | Lactobacillaceae | 33958 | Bacteria | Bacteria | 558 | 1.36e-154 | NTclustered | gi|310941352|dbj|AB596991.1| | 1633 | g27572 | i0 | 100 | 112 | 302 | 0 | 100 | 0 | 1 | 302 | 115 | 416 | Lactobacillus vaginalis gene for 16S rRNA, partial sequence, strain: HE3 | blastn | 33824 | 558 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Limosilactobacillus | Limosilactobacillus vaginalis | ||
| 23620764 | 23620764 | PRJNA688736_P_NODE_37139_length_262_cov_2.132275_g36854_i0 | PRJNA688736 | 37139 | 262 | 2.132275 | 5.5865605 | Lapidilactobacillus dextrinicus | 51664 | Bacteria | Bacteria | 424 | 4.4e-114 | NTclustered | gi|1757085258|gb|CP044499.1| | 51664 | g36854 | i0 | 95.802 | 486.74427480916 | 262 | 11 | 100 | 0 | 1 | 262 | 191868 | 191607 | Lapidilactobacillus dextrinicus strain LH506 chromosome, complete genome | blastn | 127527 | 424 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lapidilactobacillus | Lapidilactobacillus dextrinicus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;