contig_metadata
4 rows where analysis = "blastn", bioproject = "PRJNA688736" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1943321 | 1943321 | PRJNA688736_P_NODE_13402_length_415_cov_1.783626_g13117_i0 | PRJNA688736 | 13402 | 415 | 1.783626 | 7.4020479 | Ripella decalvata | 2047822 | Discosea | other_Eukaryota | 643 | 5.179999999999999e-180 | NTclustered | gi|1269228434|gb|MF683559.1| | 2047822 | g13117 | i0 | 94.774 | 101.067469879518 | 421 | 9 | 100 | 11 | 1 | 415 | 618 | 1031 | Ripella decalvata clone 26.2.15 18S ribosomal RNA gene, partial sequence | blastn | 41943 | 643 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Ripella | Ripella decalvata | |||
| 4496039 | 4496039 | PRJNA688736_P_NODE_42944_length_250_cov_0.881356_g42659_i0 | PRJNA688736 | 42944 | 250 | 0.881356 | 2.20339 | Raperostelium minutum | 35219 | Evosea | other_Eukaryota | 65.8 | 2.91e-6 | NTclustered | gi|156629701|gb|EF612188.1| | 35219 | g42659 | i0 | 95.122 | 15.316 | 41 | 2 | 16 | 0 | 175 | 215 | 546 | 586 | Raperostelium minutum strain 71-2 unknown (Dm0233813) gene, partial cds; adenylyl cyclase G (AcgA) gene, complete cds; and putative mitochondrial tryptophanyl-tRNA synthetase (MtrpS) gene, partial cds; nuclear genes for mitochondrial products | blastn | 3829 | 65.8 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Raperosteliaceae | Raperostelium | Raperostelium minutum | ||
| 22344882 | 22344882 | PRJNA688736_P_NODE_22498_length_332_cov_1.204633_g22213_i0 | PRJNA688736 | 22498 | 332 | 1.204633 | 3.99938156 | Protacanthamoeba bohemica | 325062 | Discosea | other_Eukaryota | 470 | 7.289999999999999e-128 | NTclustered | gi|2806326584|gb|PQ345834.1| | 325062 | g22213 | i0 | 92.771 | 45.2530120481928 | 332 | 13 | 100 | 10 | 1 | 332 | 460 | 140 | Protacanthamoeba bohemica isolate 6FSb1 small subunit ribosomal RNA gene, partial sequence | blastn | 15024 | 470 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Protacanthamoeba | Protacanthamoeba bohemica | |||
| 24894307 | 24894307 | PRJNA688736_P_NODE_46680_length_246_cov_0.901734_g46395_i0 | PRJNA688736 | 46680 | 246 | 0.901734 | 2.21826564 | Acanthamoeba castellanii | 5755 | Discosea | other_Eukaryota | 318 | 1.98e-82 | NTclustered | gi|300078498|gb|GU001160.1| | 5755 | g46395 | i0 | 90 | 1.05691056910569 | 260 | 7 | 100 | 17 | 1 | 246 | 5662 | 5916 | Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 260 | 318 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;