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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA688655" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA688655 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1943240 1943240 PRJNA688655_P_NODE_9382_length_249_cov_0.875000_g9317_i0 PRJNA688655 9382 249 0.875 2.17875 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 95.3 3.69e-15   NTclustered gi|2874253862|emb|OY969918.1| 171953 g9317 i0 88.608 5.4859437751004 79 8 32 1 162 240 2378450 2378527 MAG: uncultured Acidobacteriota bacterium isolate MFD04967.bin.c.4 genome assembly, chromosome: 1 blastn 1366 95.3 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
7554798 7554798 PRJNA688655_P_NODE_16046_length_241_cov_0.916667_g15981_i0 PRJNA688655 16046 241 0.916667 2.20916747 Acidobacteriaceae 204434 Bacteria Bacteria 128 3.4999999999999997e-25   NTclustered gi|2874253852|emb|OY969908.1| 194844 g15981 i0 98.611 37.8132780082988 72 1 30 0 1 72 28482 28553 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09286.bin.1.44 genome assembly, chromosome: 1 blastn 9113 128 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
10871129 10871129 PRJNA688655_P_NODE_11409_length_247_cov_0.885057_g11344_i0 PRJNA688655 11409 247 0.885057 2.18609079 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 346 9.14e-91   NTclustered gi|2874253700|emb|OY969426.1| 2651171 g11344 i0 91.903 48.8704453441296 247 20 100 0 1 247 1214166 1214412 MAG: Thermoanaerobaculia bacterium isolate MFD02979.bin.c.1 genome assembly, chromosome: 1 blastn 12071 346 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
15969797 15969797 PRJNA688655_P_NODE_12473_length_246_cov_0.890173_g12408_i0 PRJNA688655 12473 246 0.890173 2.18982558 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 76.8 1.32e-9   NTclustered gi|2874253744|emb|OY969603.1| 171953 g12408 i0 100 0.280487804878049 41 0 17 0 1 41 6763163 6763203 MAG: uncultured Acidobacteriota bacterium isolate MFD01476.bin.c.1 genome assembly, chromosome: 1 blastn 69 76.8 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
23619956 23619956 PRJNA688655_P_NODE_13839_length_244_cov_0.900585_g13774_i0 PRJNA688655 13839 244 0.900585 2.1974274 Thermoanaerobaculaceae bacterium 2699758 Bacteria Bacteria 75 4.7e-9   NTclustered gi|2874254005|emb|OY970330.1| 2699758 g13774 i0 85.714 3.63934426229508 70 10 29 0 1 70 4524168 4524099 MAG: Thermoanaerobaculaceae bacterium isolate MFD05537.bin.c.1 genome assembly, chromosome: 1 blastn 888 75 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Thermoanaerobaculaceae   Thermoanaerobaculaceae bacterium
23619993 23619993 PRJNA688655_P_NODE_16119_length_241_cov_0.916667_g16054_i0 PRJNA688655 16119 241 0.916667 2.20916747 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 217 7.269999999999999e-52   NTclustered gi|2874253862|emb|OY969918.1| 171953 g16054 i0 83.193 4.08298755186722 238 38 98 2 1 237 1143783 1143547 MAG: uncultured Acidobacteriota bacterium isolate MFD04967.bin.c.4 genome assembly, chromosome: 1 blastn 984 217 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;