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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA688655" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA688655 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
667185 667185 PRJNA688655_P_NODE_4301_length_310_cov_1.232068_g4236_i0 PRJNA688655 4301 310 1.232068 3.8194108 candidate division TM6 bacterium GW2011_GWF2_28_16 1619077 Bacteria Bacteria 91.6 6.14e-14   NTclustered gi|837367205|gb|CP011212.1| 1619077 g4236 i0 87.342 0.254838709677419 79 10 25 0 32 110 257579 257501 Candidate division TM6 bacterium GW2011_GWF2_28_16 chromosome, complete genome blastn 79 91.6 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium GW2011_GWF2_28_16
3728687 3728687 PRJNA688655_P_NODE_14183_length_244_cov_0.888889_g14118_i0 PRJNA688655 14183 244 0.888889 2.16888916 Candidatus Nanosynbacterales 2093819 Bacteria Bacteria 91.6 4.66e-14   NTclustered gi|1842065531|gb|CP040002.1| 713059 g14118 i0 94.828 10.2377049180328 58 3 24 0 139 196 454904 454847 Candidatus Saccharibacteria bacterium oral taxon 488 strain AC002 chromosome, complete genome blastn 2498 91.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
15969862 15969862 PRJNA688655_P_NODE_16653_length_241_cov_0.916667_g16588_i0 PRJNA688655 16653 241 0.916667 2.20916747 candidate division WWE3 bacterium RAAC2_WWE3_1 1394710 Bacteria Bacteria 89.8 1.65e-13   NTclustered gi|563350791|gb|CP006914.1| 1394710 g16588 i0 89.855 0.286307053941909 69 7 29 0 150 218 299013 298945 Candidate division WWE3 bacterium RAAC2_WWE3_1 chromosome, complete genome blastn 69 89.8 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium RAAC2_WWE3_1
18519198 18519198 PRJNA688655_P_NODE_14555_length_243_cov_0.905882_g14490_i0 PRJNA688655 14555 243 0.905882 2.20129326 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 167 7.5e-37   NTclustered gi|2870347126|gb|CP175956.1| 2045217 g14490 i0 79.583 1.36625514403292 240 43 98 6 7 243 1121929 1121693 MAG: Candidatus Moraniibacteriota bacterium isolate MKparc2 chromosome, complete genome blastn 332 167 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;