RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA688414" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688414 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10871020 10871020 PRJNA688414_P_NODE_3509_length_317_cov_4.086066_g3475_i0 PRJNA688414 3509 317 4.086066 12.95282922 Malassezia restricta 76775 Fungi Fungi 418 2.5399999999999995e-112   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g3475 i0 91.195 74.4006309148265 318 13 100 11 1 317 3285 2982 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 23585 418 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
10871037 10871037 PRJNA688414_P_NODE_4429_length_288_cov_2.176744_g4395_i0 PRJNA688414 4429 288 2.176744 6.26902272 Malassezia restricta 76775 Fungi Fungi 532 7.8e-147   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g4395 i0 100 99.7395833333333 288 0 100 0 1 288 1597 1884 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 28725 532 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15969733 15969733 PRJNA688414_P_NODE_7013_length_248_cov_0.891429_g6979_i0 PRJNA688414 7013 248 0.891429 2.21074392 Moesziomyces antarcticus 84753 Fungi Fungi 431 2.47e-116   NTclustered gi|955497413|ref|XM_014802950.1| 84753 g6979 i0 97.984 1 248 5 100 0 1 248 1131 884 Moesziomyces antarcticus allantoicase (PAN0_003d1995), partial mRNA blastn 248 431 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Moesziomyces Moesziomyces antarcticus
16479677 16479677 PRJNA688414_P_NODE_913_length_561_cov_3.051230_g881_i0 PRJNA688414 913 561 3.05123 17.1174003 Malassezia 55193 Fungi Fungi 1014 0   NTclustered gi|953821272|gb|KT310070.1| 76773 g881 i0 99.287 97.4991087344029 561 4 100 0 1 561 587 27 Malassezia globosa isolate 1242 large subunit ribosomal RNA gene, partial sequence blastn 54697 1014 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;