contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA688352" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1176834 | 1176834 | PRJNA688352_P_NODE_8381_length_249_cov_0.875000_g8278_i0 | PRJNA688352 | 8381 | 249 | 0.875 | 2.17875 | Desulfovibrionaceae | 194924 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1566432249|gb|CP026538.1| | 296842 | g8278 | i0 | 100 | 0.582329317269076 | 29 | 0 | 12 | 0 | 213 | 241 | 1457527 | 1457555 | Solidesulfovibrio carbinolicus strain DSM 3852 chromosome, complete genome | blastn | 145 | 54.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Solidesulfovibrio | Solidesulfovibrio carbinolicus | ||
| 3217819 | 3217819 | PRJNA688352_P_NODE_8403_length_249_cov_0.875000_g8300_i0 | PRJNA688352 | 8403 | 249 | 0.875 | 2.17875 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 305 | 1.57e-78 | NTclustered | gi|2381092847|gb|CP113000.1| | 2202153 | g8300 | i0 | 90.476 | 1.04417670682731 | 231 | 22 | 93 | 0 | 2 | 232 | 1462660 | 1462890 | MAG: Thermodesulfobacteriota bacterium isolate ORM2a chromosome, complete genome | blastn | 260 | 305 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 4494793 | 4494793 | PRJNA688352_P_NODE_3484_length_334_cov_1.111111_g3381_i0 | PRJNA688352 | 3484 | 334 | 1.111111 | 3.71111074 | Syntrophotalea carbinolica | 19 | Bacteria | Bacteria | 97.1 | 1.43e-15 | NTclustered | gi|90823168|gb|CP000142.2| | 338963 | g3381 | i0 | 75.688 | 42.188622754491 | 218 | 39 | 64 | 13 | 22 | 232 | 1139797 | 1140007 | Pelobacter carbinolicus DSM 2380, complete genome | blastn | 14091 | 97.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Syntrophotaleaceae | Syntrophotalea | Syntrophotalea carbinolica | ||
| 4494860 | 4494860 | PRJNA688352_P_NODE_9824_length_246_cov_0.890173_g9721_i0 | PRJNA688352 | 9824 | 246 | 0.890173 | 2.18982558 | Geoalkalibacter halelectricus | 2847045 | Bacteria | Bacteria | 156 | 1.65e-33 | NTclustered | gi|2304895958|gb|CP092109.1| | 2847045 | g9721 | i0 | 83.735 | 2.76829268292683 | 166 | 25 | 67 | 2 | 1 | 165 | 843665 | 843501 | Geoalkalibacter halelectricus strain SAP-1 chromosome | blastn | 681 | 156 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geoalkalibacteraceae | Geoalkalibacter | Geoalkalibacter halelectricus | ||
| 8320083 | 8320083 | PRJNA688352_P_NODE_9387_length_247_cov_0.885057_g9284_i0 | PRJNA688352 | 9387 | 247 | 0.885057 | 2.18609079 | Desulfosarcina widdelii | 947919 | Bacteria | Bacteria | 167 | 7.64e-37 | NTclustered | gi|1773416083|dbj|AP021875.1| | 947919 | g9284 | i0 | 81.592 | 0.813765182186235 | 201 | 37 | 81 | 0 | 40 | 240 | 5114839 | 5115039 | Desulfosarcina widdelii PP31 DNA, complete genome | blastn | 201 | 167 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | Desulfosarcina widdelii | ||
| 10870900 | 10870900 | PRJNA688352_P_NODE_12389_length_241_cov_0.916667_g12286_i0 | PRJNA688352 | 12389 | 241 | 0.916667 | 2.20916747 | Desulfobulbus propionicus | 894 | Bacteria | Bacteria | 305 | 1.51e-78 | NTclustered | gi|320120648|gb|CP002364.1| | 577650 | g12286 | i0 | 90.476 | 88.1410788381743 | 231 | 22 | 96 | 0 | 1 | 231 | 2222778 | 2222548 | Desulfobulbus propionicus DSM 2032, complete genome | blastn | 21242 | 305 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | Desulfobulbus propionicus | ||
| 12146286 | 12146286 | PRJNA688352_P_NODE_7090_length_251_cov_0.865169_g6987_i0 | PRJNA688352 | 7090 | 251 | 0.865169 | 2.17157419 | Geoalkalibacter subterraneus | 483547 | Bacteria | Bacteria | 178 | 3.6e-40 | NTclustered | gi|749207097|gb|CP010311.1| | 483547 | g6987 | i0 | 79.92 | 3.56972111553785 | 249 | 45 | 99 | 4 | 1 | 248 | 2853078 | 2852834 | Geoalkalibacter subterraneus strain Red1, complete genome | blastn | 896 | 178 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geoalkalibacteraceae | Geoalkalibacter | Geoalkalibacter subterraneus | ||
| 12146298 | 12146298 | PRJNA688352_P_NODE_8510_length_248_cov_0.880000_g8407_i0 | PRJNA688352 | 8510 | 248 | 0.88 | 2.1824 | Syntrophus buswellii | 43774 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2869717242|gb|CP175563.1| | 43774 | g8407 | i0 | 100 | 1.93145161290323 | 248 | 0 | 100 | 0 | 1 | 248 | 3054161 | 3053914 | Syntrophus buswellii strain DM-2 chromosome, complete genome | blastn | 479 | 459 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophaceae | Syntrophus | Syntrophus buswellii | ||
| 13420793 | 13420793 | PRJNA688352_P_NODE_10091_length_245_cov_0.895349_g9988_i0 | PRJNA688352 | 10091 | 245 | 0.895349 | 2.19360505 | Desulfococcus multivorans | 897 | Bacteria | Bacteria | 104 | 6.02e-18 | NTclustered | gi|1092202713|gb|CP015381.1| | 897 | g9988 | i0 | 88.372 | 1.01632653061224 | 86 | 10 | 35 | 0 | 160 | 245 | 1407379 | 1407464 | Desulfococcus multivorans strain DSM 2059 chromosome, complete genome | blastn | 249 | 104 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfococcus | Desulfococcus multivorans | ||
| 13420825 | 13420825 | PRJNA688352_P_NODE_12331_length_241_cov_0.916667_g12228_i0 | PRJNA688352 | 12331 | 241 | 0.916667 | 2.20916747 | Geobacter pickeringii | 345632 | Bacteria | Bacteria | 191 | 4.41e-44 | NTclustered | gi|747129828|gb|CP009788.1| | 345632 | g12228 | i0 | 80.913 | 8.46473029045643 | 241 | 46 | 100 | 0 | 1 | 241 | 6798 | 6558 | Geobacter pickeringii strain G13, complete genome | blastn | 2040 | 191 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter pickeringii | ||
| 22344231 | 22344231 | PRJNA688352_P_NODE_8178_length_249_cov_0.875000_g8075_i0 | PRJNA688352 | 8178 | 249 | 0.875 | 2.17875 | Desulfoferula mesophila | 3058419 | Bacteria | Bacteria | 174 | 4.61e-39 | NTclustered | gi|2619692108|dbj|AP028679.1| | 3058419 | g8075 | i0 | 81.69 | 5.6706827309237 | 213 | 35 | 85 | 4 | 1 | 211 | 571863 | 572073 | Desulfoferula mesophila 12FAK DNA, complete genome | blastn | 1412 | 174 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculales | Desulfarculaceae | Desulfoferula | Desulfoferula mesophila | ||
| 23619688 | 23619688 | PRJNA688352_P_NODE_11479_length_243_cov_0.870588_g11376_i0 | PRJNA688352 | 11479 | 243 | 0.870588 | 2.11552884 | Desulfopila sp. IMCC35008 | 2653858 | Bacteria | Bacteria | 226 | 1.2199999999999999e-54 | NTclustered | gi|2557433592|gb|CP050700.1| | 2653858 | g11376 | i0 | 83.682 | 0.983539094650206 | 239 | 39 | 98 | 0 | 1 | 239 | 2907027 | 2906789 | Desulfopila sp. IMCC35008 chromosome, complete genome | blastn | 239 | 226 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulfopila | Desulfopila sp. IMCC35008 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;