contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJNA688352" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 666900 | 666900 | PRJNA688352_P_NODE_7181_length_251_cov_0.865169_g7078_i0 | PRJNA688352 | 7181 | 251 | 0.865169 | 2.17157419 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 453 | 5.34e-123 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g7078 | i0 | 99.203 | 1 | 251 | 2 | 100 | 0 | 1 | 251 | 1299851 | 1300101 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 251 | 453 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 1942915 | 1942915 | PRJNA688352_P_NODE_9102_length_247_cov_0.885057_g8999_i0 | PRJNA688352 | 9102 | 247 | 0.885057 | 2.18609079 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 418 | 1.9099999999999998e-112 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g8999 | i0 | 97.541 | 0.987854251012146 | 244 | 6 | 99 | 0 | 4 | 247 | 1997159 | 1996916 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 244 | 418 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 1942926 | 1942926 | PRJNA688352_P_NODE_9802_length_246_cov_0.890173_g9699_i0 | PRJNA688352 | 9802 | 246 | 0.890173 | 2.18982558 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 449 | 6.74e-122 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g9699 | i0 | 99.593 | 1.9349593495935 | 246 | 1 | 100 | 0 | 1 | 246 | 1806556 | 1806311 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 476 | 449 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 3217748 | 3217748 | PRJNA688352_P_NODE_12163_length_241_cov_0.916667_g12060_i0 | PRJNA688352 | 12163 | 241 | 0.916667 | 2.20916747 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 298 | 2.52e-76 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g12060 | i0 | 89.121 | 0.991701244813278 | 239 | 26 | 99 | 0 | 1 | 239 | 1960466 | 1960228 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 239 | 298 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 3217759 | 3217759 | PRJNA688352_P_NODE_2623_length_374_cov_1.534884_g2520_i0 | PRJNA688352 | 2623 | 374 | 1.534884 | 5.74046616 | uncultured Sphaerochaeta sp. | 886478 | Bacteria | Bacteria | 396 | 1.43e-105 | NTclustered | gi|2621785415|emb|OY781873.1| | 886478 | g2520 | i0 | 87.356 | 0.93048128342246 | 348 | 40 | 93 | 3 | 1 | 346 | 3258266 | 3257921 | MAG: uncultured Sphaerochaeta sp. isolate d3c3752c-658c-4035-93a5-350d78b9f8a8 genome assembly, chromosome: 1 | blastn | 348 | 396 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | uncultured Sphaerochaeta sp. | ||
| 3217795 | 3217795 | PRJNA688352_P_NODE_6883_length_253_cov_1.711111_g6780_i0 | PRJNA688352 | 6883 | 253 | 1.711111 | 4.32911083 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 462 | 8.95e-126 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g6780 | i0 | 99.605 | 1 | 253 | 1 | 100 | 0 | 1 | 253 | 2620396 | 2620648 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 253 | 462 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 5770507 | 5770507 | PRJNA688352_P_NODE_3825_length_322_cov_1.172691_g3722_i0 | PRJNA688352 | 3825 | 322 | 1.172691 | 3.77606502 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 579 | 1.1199999999999997e-160 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g3722 | i0 | 99.068 | 1 | 322 | 3 | 100 | 0 | 1 | 322 | 1815695 | 1815374 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 322 | 579 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 7045492 | 7045492 | PRJNA688352_P_NODE_11346_length_243_cov_0.905882_g11243_i0 | PRJNA688352 | 11346 | 243 | 0.905882 | 2.20129326 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 416 | 6.739999999999998e-112 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g11243 | i0 | 97.531 | 2.83950617283951 | 243 | 6 | 100 | 0 | 1 | 243 | 1559945 | 1560187 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 690 | 416 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 7045550 | 7045550 | PRJNA688352_P_NODE_8146_length_249_cov_0.875000_g8043_i0 | PRJNA688352 | 8146 | 249 | 0.875 | 2.17875 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 438 | 1.4799999999999996e-118 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g8043 | i0 | 98.394 | 2.98795180722892 | 249 | 4 | 100 | 0 | 1 | 249 | 2164749 | 2164997 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 744 | 438 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 7045562 | 7045562 | PRJNA688352_P_NODE_9306_length_247_cov_0.885057_g9203_i0 | PRJNA688352 | 9306 | 247 | 0.885057 | 2.18609079 | uncultured Sphaerochaeta sp. | 886478 | Bacteria | Bacteria | 235 | 2.07e-57 | NTclustered | gi|2621785415|emb|OY781873.1| | 886478 | g9203 | i0 | 86.697 | 125.546558704453 | 218 | 21 | 87 | 8 | 4 | 218 | 1914059 | 1914271 | MAG: uncultured Sphaerochaeta sp. isolate d3c3752c-658c-4035-93a5-350d78b9f8a8 genome assembly, chromosome: 1 | blastn | 31010 | 235 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | uncultured Sphaerochaeta sp. | ||
| 12146239 | 12146239 | PRJNA688352_P_NODE_11830_length_242_cov_0.911243_g11727_i0 | PRJNA688352 | 11830 | 242 | 0.911243 | 2.20520806 | Treponemataceae bacterium | 2854022 | Bacteria | Bacteria | 193 | 1.23e-44 | NTclustered | gi|2814788384|emb|OY762953.2| | 2854022 | g11727 | i0 | 82.143 | 0.925619834710744 | 224 | 40 | 93 | 0 | 19 | 242 | 1790093 | 1789870 | MAG: Treponemataceae bacterium isolate a6accef0-0fd1-414a-935d-742eec6b5613 genome assembly, chromosome: 1 | blastn | 224 | 193 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponemataceae bacterium | |||
| 12146241 | 12146241 | PRJNA688352_P_NODE_11950_length_242_cov_0.911243_g11847_i0 | PRJNA688352 | 11950 | 242 | 0.911243 | 2.20520806 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g11847 | i0 | 99.587 | 6.32231404958678 | 242 | 1 | 100 | 0 | 1 | 242 | 2285841 | 2286082 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 1530 | 442 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 12146242 | 12146242 | PRJNA688352_P_NODE_11970_length_242_cov_0.911243_g11867_i0 | PRJNA688352 | 11970 | 242 | 0.911243 | 2.20520806 | Parasphaerochaeta coccoides | 273376 | Bacteria | Bacteria | 346 | 8.930000000000001e-91 | NTclustered | gi|329747886|gb|CP002659.1| | 760011 | g11867 | i0 | 92.562 | 187.669421487603 | 242 | 17 | 100 | 1 | 1 | 242 | 771153 | 771393 | Sphaerochaeta coccoides DSM 17374, complete genome | blastn | 45416 | 346 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Parasphaerochaeta | Parasphaerochaeta coccoides | ||
| 12146297 | 12146297 | PRJNA688352_P_NODE_8350_length_249_cov_0.875000_g8247_i0 | PRJNA688352 | 8350 | 249 | 0.875 | 2.17875 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 442 | 1.1399999999999995e-119 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g8247 | i0 | 98.79 | 2.98393574297189 | 248 | 3 | 99 | 0 | 2 | 249 | 2598685 | 2598932 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 743 | 442 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 13420850 | 13420850 | PRJNA688352_P_NODE_5111_length_288_cov_1.074419_g5008_i0 | PRJNA688352 | 5111 | 288 | 1.074419 | 3.09432672 | Sphaerochaeta globosa | 1131703 | Bacteria | Bacteria | 268 | 2.43e-67 | NTclustered | gi|324025087|gb|CP002541.1| | 158189 | g5008 | i0 | 83.566 | 0.993055555555556 | 286 | 47 | 99 | 0 | 3 | 288 | 115909 | 116194 | Sphaerochaeta globosa str. Buddy, complete genome | blastn | 286 | 268 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta globosa | ||
| 15969581 | 15969581 | PRJNA688352_P_NODE_3893_length_320_cov_1.384615_g3790_i0 | PRJNA688352 | 3893 | 320 | 1.384615 | 4.430768 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 569 | 6.699999999999998e-158 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g3790 | i0 | 98.75 | 1.896875 | 320 | 4 | 100 | 0 | 1 | 320 | 1150599 | 1150918 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 607 | 569 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 18518915 | 18518915 | PRJNA688352_P_NODE_10355_length_245_cov_0.895349_g10252_i0 | PRJNA688352 | 10355 | 245 | 0.895349 | 2.19360505 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 431 | 2.4299999999999996e-116 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g10252 | i0 | 98.367 | 1 | 245 | 4 | 100 | 0 | 1 | 245 | 2152300 | 2152544 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 245 | 431 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 19793763 | 19793763 | PRJNA688352_P_NODE_10716_length_244_cov_0.900585_g10613_i0 | PRJNA688352 | 10716 | 244 | 0.900585 | 2.1974274 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g10613 | i0 | 100 | 1.99590163934426 | 244 | 0 | 100 | 0 | 1 | 244 | 576284 | 576041 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 487 | 451 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 21069273 | 21069273 | PRJNA688352_P_NODE_11137_length_243_cov_0.905882_g11034_i0 | PRJNA688352 | 11137 | 243 | 0.905882 | 2.20129326 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 438 | 1.4399999999999996e-118 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g11034 | i0 | 99.177 | 1 | 243 | 2 | 100 | 0 | 1 | 243 | 2530655 | 2530897 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 243 | 438 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 21069302 | 21069302 | PRJNA688352_P_NODE_3377_length_338_cov_1.090566_g3274_i0 | PRJNA688352 | 3377 | 338 | 1.090566 | 3.68611308 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 481 | 3.43e-131 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g3274 | i0 | 92.308 | 1 | 338 | 26 | 100 | 0 | 1 | 338 | 2206735 | 2207072 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 338 | 481 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 21579025 | 21579025 | PRJNA688352_P_NODE_8537_length_248_cov_0.880000_g8434_i0 | PRJNA688352 | 8537 | 248 | 0.88 | 2.1824 | Sphaerochaeta | 399320 | Bacteria | Bacteria | 250 | 7.41e-62 | NTclustered | gi|359350094|gb|CP003155.1| | 158190 | g8434 | i0 | 84.959 | 1.98387096774194 | 246 | 37 | 99 | 0 | 3 | 248 | 3088750 | 3088995 | Sphaerochaeta pleomorpha str. Grapes, complete genome | blastn | 492 | 250 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta pleomorpha |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;