contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA688352" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1942895 | 1942895 | PRJNA688352_P_NODE_7562_length_250_cov_0.870056_g7459_i0 | PRJNA688352 | 7562 | 250 | 0.870056 | 2.17514 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 65.8 | 2.91e-6 | NTclustered | gi|2621703574|emb|OY761449.1| | 2026734 | g7459 | i0 | 97.368 | 7.816 | 38 | 1 | 16 | 0 | 102 | 139 | 257658 | 257695 | MAG: Dehalococcoidia bacterium isolate 8faaec51-6d46-4fc3-9050-60b85d5760d4 genome assembly, chromosome: 1 | blastn | 1954 | 65.8 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 1942918 | 1942918 | PRJNA688352_P_NODE_9322_length_247_cov_0.885057_g9219_i0 | PRJNA688352 | 9322 | 247 | 0.885057 | 2.18609079 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 158 | 4.6e-34 | NTclustered | gi|2621780275|emb|OY776562.1| | 2052143 | g9219 | i0 | 78.512 | 0.979757085020243 | 242 | 50 | 98 | 2 | 6 | 246 | 2500730 | 2500490 | MAG: Anaerolineae bacterium isolate f6896fb1-f4fb-4b0c-86b4-943ec43acfa7 genome assembly, chromosome: 1 | blastn | 242 | 158 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 8320076 | 8320076 | PRJNA688352_P_NODE_8967_length_248_cov_0.880000_g8864_i0 | PRJNA688352 | 8967 | 248 | 0.88 | 2.1824 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 126 | 1.2999999999999998e-24 | NTclustered | gi|2874253788|emb|OY969772.1| | 1672391 | g8864 | i0 | 87.85 | 0.431451612903226 | 107 | 13 | 43 | 0 | 23 | 129 | 2651088 | 2650982 | MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 | blastn | 107 | 126 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 13420849 | 13420849 | PRJNA688352_P_NODE_4991_length_291_cov_1.059633_g4888_i0 | PRJNA688352 | 4991 | 291 | 1.059633 | 3.08353203 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 87.9 | 7.39e-13 | NTclustered | gi|2621701928|emb|OY761144.1| | 2026734 | g4888 | i0 | 75.576 | 5.57388316151203 | 217 | 31 | 71 | 20 | 39 | 244 | 2285246 | 2285041 | MAG: Dehalococcoidia bacterium isolate d500c233-76a3-46e4-a508-06ea1f82037c genome assembly, chromosome: 1 | blastn | 1622 | 87.9 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 17244810 | 17244810 | PRJNA688352_P_NODE_12374_length_241_cov_0.916667_g12271_i0 | PRJNA688352 | 12374 | 241 | 0.916667 | 2.20916747 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 148 | 2.69e-31 | NTclustered | gi|2621705867|emb|OY763929.1| | 2026734 | g12271 | i0 | 83.133 | 3.53941908713693 | 166 | 24 | 68 | 4 | 78 | 241 | 1407740 | 1407903 | MAG: Dehalococcoidia bacterium isolate b8c59f79-82fb-4549-ad1a-ab6c7f2c8c82 genome assembly, chromosome: 1 | blastn | 853 | 148 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 19793832 | 19793832 | PRJNA688352_P_NODE_8536_length_248_cov_0.880000_g8433_i0 | PRJNA688352 | 8536 | 248 | 0.88 | 2.1824 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 141 | 4.65e-29 | NTclustered | gi|2874253788|emb|OY969772.1| | 1672391 | g8433 | i0 | 81.319 | 29.6693548387097 | 182 | 26 | 72 | 5 | 34 | 211 | 1442156 | 1441979 | MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 | blastn | 7358 | 141 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 19793845 | 19793845 | PRJNA688352_P_NODE_9656_length_246_cov_0.890173_g9553_i0 | PRJNA688352 | 9656 | 246 | 0.890173 | 2.18982558 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 200 | 7.5e-47 | NTclustered | gi|2874253981|emb|OY970306.1| | 1672391 | g9553 | i0 | 82.533 | 1.16260162601626 | 229 | 38 | 93 | 2 | 19 | 246 | 2759705 | 2759478 | MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 | blastn | 286 | 200 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 21069335 | 21069335 | PRJNA688352_P_NODE_7097_length_251_cov_0.865169_g6994_i0 | PRJNA688352 | 7097 | 251 | 0.865169 | 2.17157419 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 302 | 2.0500000000000002e-77 | NTclustered | gi|2556910457|gb|CP129484.1| | 2073117 | g6994 | i0 | 90.708 | 2.9003984063745 | 226 | 21 | 90 | 0 | 1 | 226 | 1809785 | 1810010 | MAG: Anaerolineales bacterium isolate cMAG.12 chromosome, complete genome | blastn | 728 | 302 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;