RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA688157" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688157 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10105331 10105331 PRJNA688157_S_NODE_30488_length_349_cov_7.894928_g30346_i0 PRJNA688157 30488 349 7.894928 27.55329872 Timema 61471 Arthropoda Arthropoda 54.7 0.009   NTclustered gi|1947819235|emb|OD566261.1| 61472 g30346 i0 100 0.166189111747851 29 0 8 0 236 264 111505 111477 4_Tbi_b3v08 blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema bartmani
10870872 10870872 PRJNA688157_S_NODE_72129_length_267_cov_5.273196_g71987_i0 PRJNA688157 72129 267 5.273196 14.07943332 Tribolium castaneum 7070 Arthropoda Arthropoda 54.7 0.007   NTclustered gi|2733082152|emb|OX466070.1| 7070 g71987 i0 100 1.99625468164794 29 0 11 0 239 267 2891318 2891346 Tribolium castaneum genome assembly, chromosome: LG10 blastn 533 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Coleoptera Tenebrionidae Tribolium Tribolium castaneum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;