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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA685607" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 19 ✖

tax_clade 1

bioproject 1

  • PRJNA685607 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1942222 1942222 PRJNA685607_P_NODE_14222_length_427_cov_1.415254_g13864_i0 PRJNA685607 14222 427 1.415254 6.04313458 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 226 2.2899999999999998e-54   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g13864 i0 80.546 60.8009367681499 293 57 69 0 1 293 413 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 25962 226 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2451436 2451436 PRJNA685607_P_NODE_14722_length_422_cov_0.868195_g14364_i0 PRJNA685607 14722 422 0.868195 3.6637829 Ripella 1217112 Discosea other_Eukaryota 361 5.949999999999999e-95   NTclustered gi|2666517890|gb|PP259001.1| 1973050 g14364 i0 85.475 86.718009478673 358 38 83 8 51 402 459 110 Ripella sp. strain CHIESE60 small subunit ribosomal RNA gene, partial sequence blastn 36595 364 0.991758241758242 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp.
3217164 3217164 PRJNA685607_P_NODE_2203_length_1083_cov_2.506931_g1970_i0 PRJNA685607 2203 1083 2.506931 27.15006273 Paravannella minima 1443144 Discosea other_Eukaryota 189 8.04e-43   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g1970 i0 77.049 9.82548476454294 366 61 33 20 693 1053 2782 3129 Paravannella minima mitochondrion, complete genome blastn 10641 189 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
3217270 3217270 PRJNA685607_P_NODE_65223_length_251_cov_0.865169_g64864_i0 PRJNA685607 65223 251 0.865169 2.17157419 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 424 4.18e-114   NTclustered gi|470386218|ref|XM_004334142.1| 1257118 g64864 i0 97.2 0.99601593625498 250 7 99 0 2 251 217 466 Acanthamoeba castellanii str. Neff RNA polymerase Rpb7 domain containing protein (ACA1_318520), partial mRNA blastn 250 424 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4494274 4494274 PRJNA685607_P_NODE_5364_length_667_cov_1.390572_g5022_i0 PRJNA685607 5364 667 1.390572 9.27511524 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 562 2.4799999999999994e-155   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g5022 i0 82.009 90.566716641679207 667 114 99 5 1 664 1176 1839 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 60408 562 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4494372 4494372 PRJNA685607_P_NODE_79004_length_246_cov_1.468208_g78645_i0 PRJNA685607 79004 246 1.468208 3.61179168 Vermistella sp. TT-2015b 1628651 Discosea other_Eukaryota 348 2.53e-91   NTclustered gi|766943181|gb|KJ874236.1| 1628651 g78645 i0 92.276 97.0691056910569 246 17 99 2 1 245 434 678 Vermistella sp. TT-2015b strain DX2 clone 2 actin gene, partial cds blastn 23879 348 1 Eukaryota Amoebozoa   Discosea   Stygamoebida   Vermistella Vermistella sp. TT-2015b
6280514 6280514 PRJNA685607_P_NODE_9645_length_501_cov_1.016355_g9289_i0 PRJNA685607 9645 501 1.016355 5.09193855 Acanthamoeba 5754 Discosea other_Eukaryota 353 1.2e-92   NTclustered gi|881634|gb|U29610.1|ACU29610 5755 g9289 i0 79.678 40.7245508982036 497 95 99 3 1 494 567 1060 Acanthaoeba castellanii actin-related protein 3 Arp3 mRNA, complete cds blastn 20403 353 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7554116 7554116 PRJNA685607_P_NODE_26346_length_343_cov_7.514815_g25987_i0 PRJNA685607 26346 343 7.514815 25.77581545 Vannellidae 95227 Discosea other_Eukaryota 544 4.39e-150   NTclustered gi|319659362|gb|GU320599.1| 943227 g25987 i0 97.205 95.7259475218659 322 7 94 2 23 343 908 588 Platyamoeba sp. COHH 7 18S ribosomal RNA gene, partial sequence blastn 32834 545 0.998165137614679 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. COHH 7
8319474 8319474 PRJNA685607_P_NODE_5607_length_650_cov_6.819757_g5265_i0 PRJNA685607 5607 650 6.819757 44.3284205 Vannella sp. GERL14 1002217 Discosea other_Eukaryota 817 0   NTclustered gi|327391632|gb|HM363630.1| 1002217 g5265 i0 93.807 81.8830769230769 549 25 84 7 108 650 3 548 Vannella sp. GERL14 small subunit ribosomal RNA gene, partial sequence blastn 53224 817 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. GERL14
8319482 8319482 PRJNA685607_P_NODE_57687_length_263_cov_1.815789_g57328_i0 PRJNA685607 57687 263 1.815789 4.77552507 Platyamoeba placida 3454475 Discosea other_Eukaryota 385 2.08e-102   NTclustered gi|33946348|gb|AY294153.1| 197527 g57328 i0 93.13 99.1406844106464 262 18 99 0 2 263 652 913 Platyamoeba placida actin mRNA, partial cds blastn 26074 385 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
8319557 8319557 PRJNA685607_P_NODE_7687_length_555_cov_3.016598_g7333_i0 PRJNA685607 7687 555 3.016598 16.7421189 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 472 3.5399999999999996e-128   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g7333 i0 82.836 47.1351351351351 536 82 96 8 3 533 1892 2422 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 26160 472 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8319592 8319592 PRJNA685607_P_NODE_8387_length_533_cov_4.732609_g8032_i0 PRJNA685607 8387 533 4.732609 25.22480597 Cochliopodium minus 313997 Discosea other_Eukaryota 795 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g8032 i0 95.303 43.0525328330206 511 6 96 9 2 512 496 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 22947 795 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
8829496 8829496 PRJNA685607_P_NODE_9887_length_495_cov_2.971564_g9531_i0 PRJNA685607 9887 495 2.971564 14.7092418 Vannellidae 95227 Discosea other_Eukaryota 719 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g9531 i0 92.857 101.058585858586 504 23 100 11 1 495 1172 1671 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 50024 726 0.990358126721763 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
17244322 17244322 PRJNA685607_P_NODE_59254_length_261_cov_1.095745_g58895_i0 PRJNA685607 59254 261 1.095745 2.85989445 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 255 1.69e-63   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g58895 i0 87.444 86.3716475095785 223 26 85 2 1 222 684 905 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 22543 255 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18518415 18518415 PRJNA685607_P_NODE_49695_length_279_cov_1.121359_g49336_i0 PRJNA685607 49695 279 1.121359 3.12859161 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 462 1e-125   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g49336 i0 96.774 69.4551971326165 279 6 100 3 1 279 567 292 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 19378 462 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
18518461 18518461 PRJNA685607_P_NODE_6555_length_600_cov_1.726755_g6206_i0 PRJNA685607 6555 600 1.726755 10.36053 Cochliopodium minus 313997 Discosea other_Eukaryota 761 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g6206 i0 90.28 47.9666666666667 607 20 100 23 1 600 655 1229 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 28780 761 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
19793195 19793195 PRJNA685607_P_NODE_19276_length_381_cov_2.077922_g18918_i0 PRJNA685607 19276 381 2.077922 7.91688282 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 252 3.34e-62   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g18918 i0 80.539 63.6640419947507 334 60 87 5 45 377 79 408 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 24256 252 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21068881 21068881 PRJNA685607_P_NODE_8117_length_541_cov_5.743590_g7762_i0 PRJNA685607 8117 541 5.74359 31.0728219 Ripella sp. GP2 1217115 Discosea other_Eukaryota 758 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g7762 i0 92.153 97.6802218114603 548 25 99 14 8 541 3 546 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 52845 758 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
24892455 24892455 PRJNA685607_P_NODE_5280_length_672_cov_2.330551_g4939_i0 PRJNA685607 5280 672 2.330551 15.66130272 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 385 5.81e-102   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g4939 i0 78.303 70.6636904761905 613 121 90 11 17 623 1 607 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 47486 385 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;