RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA685607" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA685607 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5769865 5769865 PRJNA685607_P_NODE_16545_length_403_cov_1.472727_g16187_i0 PRJNA685607 16545 403 1.472727 5.93508981 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 257 7.630000000000001e-64   NTclustered gi|238617630|gb|FJ973394.1| 188950 g16187 i0 79.614 87.9032258064516 363 70 90 4 38 398 697 337 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 35425 257 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8319419 8319419 PRJNA685607_P_NODE_33647_length_318_cov_1.257143_g33288_i0 PRJNA685607 33647 318 1.257143 3.99771474 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 195 4.68e-45   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g33288 i0 91.096 52.1006289308176 146 10 45 3 1 143 3695 3840 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16568 195 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;