contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA685607" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1176452 | 1176452 | PRJNA685607_P_NODE_65341_length_251_cov_0.865169_g64982_i0 | PRJNA685607 | 65341 | 251 | 0.865169 | 2.17157419 | Deinococcus | 1298 | Bacteria | Bacteria | 224 | 4.5599999999999996e-54 | NTclustered | gi|1220365372|gb|CP021083.1| | 317577 | g64982 | i0 | 83.402 | 4.61752988047809 | 241 | 40 | 96 | 0 | 1 | 241 | 137770 | 138010 | Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence | blastn | 1159 | 224 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 1942271 | 1942271 | PRJNA685607_P_NODE_33682_length_318_cov_1.224490_g33323_i0 | PRJNA685607 | 33682 | 318 | 1.22449 | 3.8938782 | Deinococcus aetherius | 200252 | Bacteria | Bacteria | 571 | 1.8499999999999996e-158 | NTclustered | gi|2281898870|dbj|AP026562.1| | 200252 | g33323 | i0 | 99.06 | 1.40566037735849 | 319 | 2 | 100 | 1 | 1 | 318 | 63500 | 63182 | Deinococcus aetherius ST0316 plasmid pDAETH-2 DNA, complete genome | blastn | 447 | 571 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aetherius | ||
| 1942470 | 1942470 | PRJNA685607_P_NODE_90562_length_243_cov_0.905882_g90203_i0 | PRJNA685607 | 90562 | 243 | 0.905882 | 2.20129326 | Deinococcus gobiensis | 502394 | Bacteria | Bacteria | 154 | 5.84e-33 | NTclustered | gi|379998737|gb|CP002191.1| | 745776 | g90203 | i0 | 78.512 | 2.65020576131687 | 242 | 46 | 98 | 6 | 2 | 240 | 2291281 | 2291043 | Deinococcus gobiensis I-0, complete genome | blastn | 644 | 154 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 3217388 | 3217388 | PRJNA685607_P_NODE_93443_length_242_cov_0.911243_g93084_i0 | PRJNA685607 | 93443 | 242 | 0.911243 | 2.20520806 | Deinococcus sp. QL22 | 2939437 | Bacteria | Bacteria | 244 | 3.3499999999999997e-60 | NTclustered | gi|2238957582|gb|CP097149.1| | 2939437 | g93084 | i0 | 85.062 | 24.0454545454545 | 241 | 35 | 99 | 1 | 1 | 240 | 1992054 | 1991814 | Deinococcus sp. QL22 chromosome, complete genome | blastn | 5819 | 244 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. QL22 | ||
| 3728227 | 3728227 | PRJNA685607_P_NODE_65403_length_251_cov_0.865169_g65044_i0 | PRJNA685607 | 65403 | 251 | 0.865169 | 2.17157419 | Deinococcus | 1298 | Bacteria | Bacteria | 135 | 2.2e-27 | NTclustered | gi|2706840606|gb|CP149783.1| | 3112952 | g65044 | i0 | 81.875 | 1.27490039840637 | 160 | 29 | 64 | 0 | 92 | 251 | 365362 | 365203 | Deinococcus sp. VB142 chromosome 2, complete sequence | blastn | 320 | 135 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. VB142 | ||
| 5770107 | 5770107 | PRJNA685607_P_NODE_92505_length_242_cov_0.911243_g92146_i0 | PRJNA685607 | 92505 | 242 | 0.911243 | 2.20520806 | Deinococcus metallilatus | 1211322 | Bacteria | Bacteria | 135 | 2.1e-27 | NTclustered | gi|1609450184|gb|CP038510.1| | 1211322 | g92146 | i0 | 77.236 | 1.01652892561983 | 246 | 46 | 99 | 9 | 1 | 241 | 784876 | 784636 | Deinococcus metallilatus strain MA1002 plasmid unnamed1, complete sequence | blastn | 246 | 135 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus metallilatus | ||
| 8829481 | 8829481 | PRJNA685607_P_NODE_94647_length_241_cov_0.916667_g94288_i0 | PRJNA685607 | 94647 | 241 | 0.916667 | 2.20916747 | Thermaceae | 188786 | Bacteria | Bacteria | 424 | 3.99e-114 | NTclustered | gi|290469363|gb|CP001743.1| | 504728 | g94288 | i0 | 98.34 | 48.850622406639 | 241 | 4 | 100 | 0 | 1 | 241 | 1887935 | 1887695 | Meiothermus ruber DSM 1279, complete genome | blastn | 11773 | 424 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Meiothermus | Meiothermus ruber | ||
| 9594935 | 9594935 | PRJNA685607_P_NODE_50948_length_276_cov_1.458128_g50589_i0 | PRJNA685607 | 50948 | 276 | 1.458128 | 4.02443328 | Deinococcus sp. QL22 | 2939437 | Bacteria | Bacteria | 359 | 1.34e-94 | NTclustered | gi|2238957582|gb|CP097149.1| | 2939437 | g50589 | i0 | 90.217 | 3.66304347826087 | 276 | 26 | 99 | 1 | 2 | 276 | 1592415 | 1592140 | Deinococcus sp. QL22 chromosome, complete genome | blastn | 1011 | 359 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. QL22 | ||
| 13930451 | 13930451 | PRJNA685607_P_NODE_77411_length_247_cov_0.885057_g77052_i0 | PRJNA685607 | 77411 | 247 | 0.885057 | 2.18609079 | Truepera | 332248 | Bacteria | Bacteria | 111 | 3.63e-20 | NTclustered | gi|2573973991|gb|CP133611.1| | 332249 | g77052 | i0 | 83.333 | 5.49392712550607 | 126 | 15 | 50 | 5 | 1 | 123 | 1979908 | 1980030 | Truepera radiovictrix strain CIP 108686 chromosome, complete genome | blastn | 1357 | 111 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 14695196 | 14695196 | PRJNA685607_P_NODE_13952_length_430_cov_1.820728_g13594_i0 | PRJNA685607 | 13952 | 430 | 1.820728 | 7.8291304 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 54.7 | 0.012 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g13594 | i0 | 100 | 0.0674418604651163 | 29 | 0 | 7 | 0 | 301 | 329 | 1334995 | 1335023 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 17244236 | 17244236 | PRJNA685607_P_NODE_25334_length_348_cov_0.956364_g24975_i0 | PRJNA685607 | 25334 | 348 | 0.956364 | 3.32814672 | Deinococcus wulumuqiensis | 980427 | Bacteria | Bacteria | 377 | 4.79e-100 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g24975 | i0 | 95.726 | 2.03448275862069 | 234 | 10 | 100 | 0 | 115 | 348 | 293389 | 293622 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 708 | 377 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 19793375 | 19793375 | PRJNA685607_P_NODE_78276_length_247_cov_0.885057_g77917_i0 | PRJNA685607 | 78276 | 247 | 0.885057 | 2.18609079 | Deinococcus sp. QL22 | 2939437 | Bacteria | Bacteria | 313 | 9.28e-81 | NTclustered | gi|2238957582|gb|CP097149.1| | 2939437 | g77917 | i0 | 89.474 | 5.49392712550607 | 247 | 26 | 100 | 0 | 1 | 247 | 1543237 | 1543483 | Deinococcus sp. QL22 chromosome, complete genome | blastn | 1357 | 313 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. QL22 | ||
| 22343547 | 22343547 | PRJNA685607_P_NODE_22418_length_362_cov_1.041522_g22059_i0 | PRJNA685607 | 22418 | 362 | 1.041522 | 3.77030964 | Deinococcus radiopugnans | 57497 | Bacteria | Bacteria | 237 | 8.830000000000001e-58 | NTclustered | gi|730601855|gb|CP010028.1| | 57497 | g22059 | i0 | 80.183 | 2.69060773480663 | 328 | 55 | 89 | 7 | 13 | 335 | 2266105 | 2265783 | Deinococcus swuensis strain DY59, complete genome | blastn | 974 | 237 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiopugnans | ||
| 23619247 | 23619247 | PRJNA685607_P_NODE_69459_length_250_cov_0.870056_g69100_i0 | PRJNA685607 | 69459 | 250 | 0.870056 | 2.17514 | Deinococcus aetherius | 200252 | Bacteria | Bacteria | 451 | 1.91e-122 | NTclustered | gi|2281898870|dbj|AP026562.1| | 200252 | g69100 | i0 | 99.2 | 1 | 250 | 2 | 100 | 0 | 1 | 250 | 517069 | 516820 | Deinococcus aetherius ST0316 plasmid pDAETH-2 DNA, complete genome | blastn | 250 | 451 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aetherius | ||
| 23619348 | 23619348 | PRJNA685607_P_NODE_93039_length_242_cov_0.911243_g92680_i0 | PRJNA685607 | 93039 | 242 | 0.911243 | 2.20520806 | Deinococcus geothermalis | 68909 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|94554390|gb|CP000359.1| | 319795 | g92680 | i0 | 99.587 | 1.98760330578512 | 242 | 1 | 100 | 0 | 1 | 242 | 93169 | 92928 | Deinococcus geothermalis DSM 11300, complete genome | blastn | 481 | 442 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 25402869 | 25402869 | PRJNA685607_P_NODE_50620_length_277_cov_1.132353_g50261_i0 | PRJNA685607 | 50620 | 277 | 1.132353 | 3.13661781 | Deinococcus | 1298 | Bacteria | Bacteria | 292 | 1.38e-74 | NTclustered | gi|2444123840|gb|CP115166.1| | 328692 | g50261 | i0 | 86.131 | 6.63537906137184 | 274 | 34 | 98 | 4 | 5 | 276 | 276805 | 276534 | Deinococcus aquaticus strain PB-314 plasmid pDATS01, complete sequence | blastn | 1838 | 294 | 0.993197278911565 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;