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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA685060" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA685060 · 27 ✖

analysis 1

  • blastn · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
666221 666221 PRJNA685060_P_NODE_841_length_1060_cov_41.360689_g783_i0 PRJNA685060 841 1060 41.360689 438.4233034 Capillaria sp. ALS-2019 2651741 Nematoda Nematoda 276 5.87e-69   NTclustered gi|1811126246|gb|MN526255.1| 2651741 g783 i0 99.342 19.9169811320755 152 1 85 0 2 153 1195 1044 Capillaria sp. ALS-2019 large subunit ribosomal RNA gene, partial sequence blastn 21112 276 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Capillaria Capillaria sp. ALS-2019
3217052 3217052 PRJNA685060_P_NODE_2383_length_639_cov_1.422261_g2295_i0 PRJNA685060 2383 639 1.422261 9.08824779 Trichinella spiralis 6334 Nematoda Nematoda 407 1.18e-108   NTclustered gi|339250985|ref|XM_003372928.1| 6334 g2295 i0 79.125 10.5211267605634 594 120 93 4 5 596 1890 2481 Trichinella spiralis integrin beta pat-3 (Tsp_11868) mRNA, complete cds blastn 6723 407 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
4494090 4494090 PRJNA685060_P_NODE_2224_length_661_cov_1.840136_g2137_i0 PRJNA685060 2224 661 1.840136 12.16329896 Trichinella spiralis 6334 Nematoda Nematoda 359 3.46e-94   NTclustered gi|339247610|ref|XM_003375391.1| 6334 g2137 i0 76.972 0.959152798789713 634 142 96 3 10 641 3614 2983 Trichinella spiralis putative myosin head (Tsp_08431) mRNA, complete cds blastn 634 359 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
4494103 4494103 PRJNA685060_P_NODE_304_length_1529_cov_160.607830_g274_i0 PRJNA685060 304 1529 160.60783 2455.6937207 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2680 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g274 i0 98.3 43.3904512753434 1529 26 100 0 1 1529 7176 5648 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 66344 2680 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
4494145 4494145 PRJNA685060_P_NODE_7464_length_348_cov_4.476364_g7374_i0 PRJNA685060 7464 348 4.476364 15.57774672 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 643 4.279999999999998e-180   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g7374 i0 100 4.2816091954023 348 0 100 0 1 348 2284 1937 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1490 643 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
8319314 8319314 PRJNA685060_P_NODE_5667_length_403_cov_1.984848_g5577_i0 PRJNA685060 5667 403 1.984848 7.99893744 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 684 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g5577 i0 97.27 1 403 11 100 0 1 403 3640 4042 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 403 684 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
8319339 8319339 PRJNA685060_P_NODE_87_length_2236_cov_2.373093_g75_i0 PRJNA685060 87 2236 2.373093 53.06235948 Ancylostoma caninum 29170 Nematoda Nematoda 708 0   NTclustered gi|86160923|gb|DQ358106.1| 29170 g75 i0 74.194 0.790250447227191 1767 424 78 29 1 1751 958 2708 Ancylostoma caninum paramyosin mRNA, complete cds blastn 1767 708 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
9594712 9594712 PRJNA685060_P_NODE_1048_length_970_cov_43.062430_g981_i0 PRJNA685060 1048 970 43.06243 417.705571 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1733 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g981 i0 98.967 1.29896907216495 968 10 99 0 1 968 7978 8945 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1260 1733 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
10870207 10870207 PRJNA685060_P_NODE_4069_length_482_cov_1.735941_g3979_i0 PRJNA685060 4069 482 1.735941 8.36723562 Trichinella spiralis 6334 Nematoda Nematoda 211 7.32e-50   NTclustered gi|339233103|ref|XM_003381621.1| 6334 g3979 i0 84.507 35.9377593360996 213 33 44 0 12 224 583 795 Trichinella spiralis syntaxin-1A (Tsp_07354) mRNA, complete cds blastn 17322 211 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
10870212 10870212 PRJNA685060_P_NODE_469_length_1296_cov_50.623058_g432_i0 PRJNA685060 469 1296 50.623058 656.07483168 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2163 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g432 i0 98.298 38.5841049382716 1234 21 100 0 63 1296 1570 337 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 50005 2163 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
10870238 10870238 PRJNA685060_P_NODE_8569_length_324_cov_3.051793_g8479_i0 PRJNA685060 8569 324 3.051793 9.88780932 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 593 4.0299999999999986e-165   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g8479 i0 99.691 1 324 1 100 0 1 324 1982 1659 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 324 593 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
12145510 12145510 PRJNA685060_P_NODE_1910_length_717_cov_3.007764_g1825_i0 PRJNA685060 1910 717 3.007764 21.56566788 Trichinella spiralis 6334 Nematoda Nematoda 359 3.77e-94   NTclustered gi|339252409|ref|XM_003371380.1| 6334 g1825 i0 80.736 2.89400278940028 462 87 64 2 56 516 1 461 Trichinella spiralis troponin C, isoform 2 (Tsp_11636) mRNA, complete cds blastn 2075 359 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
13420119 13420119 PRJNA685060_P_NODE_171_length_1869_cov_8.531180_g152_i0 PRJNA685060 171 1869 8.53118 159.4477542 Aonchotheca paranalis 2025203 Nematoda Nematoda 508 9.52e-139   NTclustered gi|1279640587|gb|MF621021.1| 2025203 g152 i0 90.981 6.56019261637239 377 34 29 0 1 377 3908 3532 Aonchotheca paranalis isolate PL 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12261 508 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Aonchotheca Aonchotheca paranalis
13420154 13420154 PRJNA685060_P_NODE_4791_length_441_cov_23.105978_g4701_i0 PRJNA685060 4791 441 23.105978 101.89736298 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 767 0   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g4701 i0 98.186 93.4943310657596 441 5 100 1 1 441 1003 566 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 41231 767 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
15968842 15968842 PRJNA685060_P_NODE_16193_length_244_cov_0.900585_g16103_i0 PRJNA685060 16193 244 0.900585 2.1974274 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 424 4.05e-114   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g16103 i0 97.951 1 244 5 100 0 1 244 5327 5084 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 244 424 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
15968845 15968845 PRJNA685060_P_NODE_1633_length_781_cov_16.115819_g1553_i0 PRJNA685060 1633 781 16.115819 125.86454639 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1327 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g1553 i0 97.311 2.16645326504481 781 21 100 0 1 781 11516 10736 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1692 1327 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
17244178 17244178 PRJNA685060_P_NODE_8454_length_327_cov_1.125984_g8364_i0 PRJNA685060 8454 327 1.125984 3.68196768 Trichinella spiralis 6334 Nematoda Nematoda 226 1.7099999999999994e-54   NTclustered gi|339241764|ref|XM_003376760.1| 6334 g8364 i0 80.756 0.889908256880734 291 54 89 2 1 290 2654 2365 Trichinella spiralis retrovirus-related Pol polyprotein from transposon TNT 1-94 (Tsp_01017) mRNA, complete cds blastn 291 226 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
17244179 17244179 PRJNA685060_P_NODE_8534_length_325_cov_1.511905_g8444_i0 PRJNA685060 8534 325 1.511905 4.91369125 Trichinella spiralis 6334 Nematoda Nematoda 329 1.26e-85   NTclustered gi|339242972|ref|XM_003377364.1| 6334 g8444 i0 85.139 5.76 323 46 99 2 4 325 3495 3174 Trichinella spiralis ATP-dependent RNA helicase DHX8 (Tsp_01590) mRNA, complete cds blastn 1872 329 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
18518229 18518229 PRJNA685060_P_NODE_1455_length_824_cov_103.890812_g1376_i0 PRJNA685060 1455 824 103.890812 856.06029088 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1395 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g1376 i0 97.209 23.8240291262136 824 23 100 0 1 824 4950 4127 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 19631 1395 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
18518260 18518260 PRJNA685060_P_NODE_2955_length_576_cov_1.759443_g2865_i0 PRJNA685060 2955 576 1.759443 10.13439168 Trichinella spiralis 6334 Nematoda Nematoda 348 6.480000000000001e-91   NTclustered gi|339246888|ref|XM_003375030.1| 6334 g2865 i0 86.111 0.5625 324 44 56 1 5 327 574 897 Trichinella spiralis putative LIM domain protein (Tsp_04264) mRNA, complete cds blastn 324 348 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
19793057 19793057 PRJNA685060_P_NODE_1016_length_984_cov_20.770582_g950_i0 PRJNA685060 1016 984 20.770582 204.38252688 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1712 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g950 i0 98.069 4.2469512195122 984 19 100 0 1 984 12113 13096 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 4179 1712 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
19793082 19793082 PRJNA685060_P_NODE_1216_length_897_cov_939.280340_g1144_i0 PRJNA685060 1216 897 939.28034 8425.3446498 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1644 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g1144 i0 99.777 51.1884057971015 896 2 99 0 1 896 2379 3274 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 45916 1644 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
19793135 19793135 PRJNA685060_P_NODE_456_length_1309_cov_3.948220_g419_i0 PRJNA685060 456 1309 3.94822 51.6821998 Trichinella spiralis 6334 Nematoda Nematoda 715 0   NTclustered gi|339254855|ref|XM_003372603.1| 6334 g419 i0 82.045 16.4507257448434 841 149 64 2 200 1039 1 840 Trichinella spiralis tropomyosin (Tsp_11392) mRNA, complete cds blastn 21534 715 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
21068588 21068588 PRJNA685060_P_NODE_1937_length_711_cov_2.086207_g1852_i0 PRJNA685060 1937 711 2.086207 14.83293177 Trichinella spiralis 6334 Nematoda Nematoda 468 5.96e-127   NTclustered gi|339244724|ref|XM_003378240.1| 6334 g1852 i0 78.745 72.6526019690577 701 147 98 2 7 706 1077 378 Trichinella spiralis kinesin heavy chain (Tsp_06224) mRNA, complete cds blastn 51656 468 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
22343449 22343449 PRJNA685060_P_NODE_1958_length_706_cov_141.011058_g1873_i0 PRJNA685060 1958 706 141.011058 995.53806948 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1243 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g1873 i0 98.444 2.328611898017 707 10 100 1 1 706 7199 7905 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1644 1243 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
22343487 22343487 PRJNA685060_P_NODE_7578_length_346_cov_1.120879_g7488_i0 PRJNA685060 7578 346 1.120879 3.87824134 Trichinella spiralis 6334 Nematoda Nematoda 329 1.35e-85   NTclustered gi|339240906|ref|XM_003376331.1| 6334 g7488 i0 83.908 86.8988439306358 348 52 100 4 1 346 1761 2106 Trichinella spiralis zinc finger protein (Tsp_00587) mRNA, complete cds blastn 30067 329 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
24892249 24892249 PRJNA685060_P_NODE_12180_length_266_cov_1.585492_g12090_i0 PRJNA685060 12180 266 1.585492 4.21740872 Trichinella spiralis 6334 Nematoda Nematoda 122 1.8299999999999994e-23   NTclustered gi|339256179|ref|XM_003370487.1| 6334 g12090 i0 83.333 1.03759398496241 138 17 50 2 1 132 1200 1337 Trichinella spiralis putative IPT/TIG domain protein (Tsp_12771) mRNA, partial cds blastn 276 122 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;