RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA685060" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA685060 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10870161 10870161 PRJNA685060_P_NODE_15889_length_245_cov_0.895349_g15799_i0 PRJNA685060 15889 245 0.895349 2.19360505 Lichtheimia ornata 688661 Fungi Fungi 56.5 0.002   NTclustered gi|2553573551|ref|XM_058485423.1| 688661 g15799 i0 94.595 3.28979591836735 37 0 14 2 182 216 82 118 Lichtheimia ornata uncharacterized protein (O0I10_005378), partial mRNA blastn 806 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
12145524 12145524 PRJNA685060_P_NODE_3650_length_512_cov_2.166287_g3560_i0 PRJNA685060 3650 512 2.166287 11.09138944 Lobosporangium transversale 64571 Fungi Fungi 60.2 3e-4   NTclustered gi|1227136130|ref|XM_022023699.1| 64571 g3560 i0 100 6.390625 32 0 6 0 302 333 320 289 Lobosporangium transversale hypothetical protein (BCR41DRAFT_350907), mRNA blastn 3272 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
17244177 17244177 PRJNA685060_P_NODE_8134_length_333_cov_1.392308_g8044_i0 PRJNA685060 8134 333 1.392308 4.63638564 Halteromyces radiatus 101107 Fungi Fungi 231 3.76e-56   NTclustered gi|2323758168|ref|XM_051548927.1| 101107 g8044 i0 83.534 21.3183183183183 249 39 74 2 66 313 275 28 Halteromyces radiatus rac protein (BX664DRAFT_380874), mRNA blastn 7099 231 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;