RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA685060" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA685060 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4494052 4494052 PRJNA685060_P_NODE_13564_length_251_cov_0.865169_g13474_i0 PRJNA685060 13564 251 0.865169 2.17157419 Orbivirus magninsulae 3431249 Viruses Viruses 60.2 1.36e-4   NTclustered gi|2672713165|gb|OR645558.1| 881914 g13474 i0 97.143 0.250996015936255 35 1 14 0 1 35 1718 1684 MAG: Tribec virus isolate Romania segment 6, complete sequence blastn 63 60.2 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus magninsulae
22343385 22343385 PRJNA685060_P_NODE_10258_length_294_cov_1.701357_g10168_i0 PRJNA685060 10258 294 1.701357 5.00198958 Orbivirus magninsulae 3431249 Viruses Viruses 52.8 0.027   NTclustered gi|2672713165|gb|OR645558.1| 881914 g10168 i0 100 0.19047619047619 28 0 10 0 267 294 28 1 MAG: Tribec virus isolate Romania segment 6, complete sequence blastn 56 52.8 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus magninsulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;