RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA685060" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA685060 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1176003 1176003 PRJNA685060_P_NODE_10701_length_287_cov_3.359813_g10611_i0 PRJNA685060 10701 287 3.359813 9.64266331 Opisthokonta 33154 Fungi Fungi 531 2.799999999999999e-146   NTclustered gi|915512607|gb|KP825390.1| 76775 g10611 i0 100 100.094076655052 287 0 100 0 1 287 519 233 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 28727 531 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
1942122 1942122 PRJNA685060_P_NODE_15142_length_247_cov_0.885057_g15052_i0 PRJNA685060 15142 247 0.885057 2.18609079 Malassezia restricta 76775 Fungi Fungi 435 1.9e-117   NTclustered gi|1546637903|ref|XM_027630593.1| 76775 g15052 i0 98.381 1 247 4 100 0 1 247 2445 2199 Malassezia restricta phospholipid-translocating ATPase (MRET_3966), partial mRNA blastn 247 435 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
3217011 3217011 PRJNA685060_P_NODE_13563_length_251_cov_0.865169_g13473_i0 PRJNA685060 13563 251 0.865169 2.17157419 Malassezia restricta 76775 Fungi Fungi 353 5.569999999999998e-93   NTclustered gi|1546630269|ref|XM_027626795.1| 76775 g13473 i0 92.063 1.78486055776892 252 19 100 1 1 251 341 592 Malassezia restricta centractin (MRET_0168), partial mRNA blastn 448 353 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
4494032 4494032 PRJNA685060_P_NODE_11584_length_275_cov_0.881188_g11494_i0 PRJNA685060 11584 275 0.881188 2.423267 Malassezia restricta 76775 Fungi Fungi 479 9.78e-131   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g11494 i0 98.182 103.061818181818 275 4 100 1 1 275 1915 1642 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 28342 479 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13420162 13420162 PRJNA685060_P_NODE_6151_length_386_cov_0.984026_g6061_i0 PRJNA685060 6151 386 0.984026 3.79834036 Malassezia restricta 76775 Fungi Fungi 641 1.72e-179   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g6061 i0 96.658 106.813471502591 389 8 100 5 1 386 1501 1887 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 41230 641 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
14695125 14695125 PRJNA685060_P_NODE_16712_length_243_cov_0.905882_g16622_i0 PRJNA685060 16712 243 0.905882 2.20129326 Malassezia restricta 76775 Fungi Fungi 431 2.4099999999999995e-116   NTclustered gi|1546636529|ref|XM_027629907.1| 76775 g16622 i0 99.163 0.983539094650206 239 2 98 0 5 243 1 239 Malassezia restricta protoheme IX farnesyltransferase, mitochondrial (MRET_3280), partial mRNA blastn 239 431 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17244174 17244174 PRJNA685060_P_NODE_7714_length_343_cov_1.040741_g7624_i0 PRJNA685060 7714 343 1.040741 3.56974163 Vanrija pseudolonga 143232 Fungi Fungi 58.4 6.97e-4   NTclustered gi|2669736302|ref|XM_062769985.1| 143232 g7624 i0 97.059 0.551020408163265 34 1 10 0 170 203 591 624 Vanrija pseudolonga uncharacterized protein (LOC62_02G003451), partial mRNA blastn 189 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
18518249 18518249 PRJNA685060_P_NODE_17635_length_241_cov_0.916667_g17545_i0 PRJNA685060 17635 241 0.916667 2.20916747 Malassezia restricta 76775 Fungi Fungi 446 8.519999999999999e-121   NTclustered gi|1546634612|ref|XM_027628966.1| 76775 g17545 i0 100 1 241 0 100 0 1 241 320 80 Malassezia restricta KH domain protein (MRET_2339), partial mRNA blastn 241 446 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
23618979 23618979 PRJNA685060_P_NODE_11319_length_278_cov_1.878049_g11229_i0 PRJNA685060 11319 278 1.878049 5.22097622 Malassezia restricta 76775 Fungi Fungi 507 4.54e-139   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g11229 i0 99.639 73.3597122302158 277 1 99 0 2 278 3285 3009 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 20394 507 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
23618983 23618983 PRJNA685060_P_NODE_1199_length_903_cov_9.006024_g1128_i0 PRJNA685060 1199 903 9.006024 81.32439672 Tilletiopsis washingtonensis 58919 Fungi Fungi 388 6.119999999999998e-103   NTclustered gi|1423587035|ref|XM_025743209.1| 58919 g1128 i0 79.815 18.6744186046512 540 103 59 6 106 642 55 591 Tilletiopsis washingtonensis putative GSP1-GTP-binding protein of the ras superfamily (FA09DRAFT_331860), mRNA blastn 16863 388 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;