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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA685060" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 20 ✖

bioproject 1

  • PRJNA685060 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1942146 1942146 PRJNA685060_P_NODE_2042_length_689_cov_2.525974_g1955_i0 PRJNA685060 2042 689 2.525974 17.40396086 Alphavirus getah 3426303 Viruses Viruses 1256 0   NTclustered gi|116878336|gb|EF011023.1| 97469 g1955 i0 99.565 100.00145137881 689 3 100 0 1 689 8575 7887 Alphavirus M1, complete genome blastn 68901 1256 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
2451304 2451304 PRJNA685060_P_NODE_10062_length_297_cov_1.937500_g9972_i0 PRJNA685060 10062 297 1.9375 5.754375 Alphavirus 11019 Viruses Viruses 549 8.029999999999997e-152   NTclustered gi|157734228|gb|EU015061.1| 59300 g9972 i0 100 99.996632996633 297 0 100 0 1 297 4824 4528 Getah virus strain M1, complete genome blastn 29699 549 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
4494052 4494052 PRJNA685060_P_NODE_13564_length_251_cov_0.865169_g13474_i0 PRJNA685060 13564 251 0.865169 2.17157419 Orbivirus magninsulae 3431249 Viruses Viruses 60.2 1.36e-4   NTclustered gi|2672713165|gb|OR645558.1| 881914 g13474 i0 97.143 0.250996015936255 35 1 14 0 1 35 1718 1684 MAG: Tribec virus isolate Romania segment 6, complete sequence blastn 63 60.2 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus magninsulae
6280048 6280048 PRJNA685060_P_NODE_7265_length_353_cov_1.753571_g7175_i0 PRJNA685060 7265 353 1.753571 6.19010563 Alphainfluenzavirus 197911 Viruses Viruses 641 1.5599999999999998e-179   NTclustered gi|1933609284|gb|MW265304.1| 11320 g7175 i0 99.433 100 353 2 100 0 1 353 1383 1031 Influenza A virus (A/chicken/Jiangsu/XZ181/2014(H7N9)) segment 5 nucleocapsid protein (NP) gene, complete cds blastn 35300 641 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
8829004 8829004 PRJNA685060_P_NODE_47_length_2725_cov_3.756033_g39_i0 PRJNA685060 47 2725 3.756033 102.35189925 Alphavirus 11019 Viruses Viruses 5011 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g39 i0 99.853 100.10128440367 2725 4 100 0 1 2725 7814 5090 Getah virus strain M1, complete genome blastn 272776 5011 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
9594717 9594717 PRJNA685060_P_NODE_11268_length_279_cov_1.495146_g11178_i0 PRJNA685060 11268 279 1.495146 4.17145734 Zebrafish picornavirus 1 2304617 Viruses Viruses 505 1.6399999999999995e-138   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g11178 i0 99.283 3.9247311827957 279 2 100 0 1 279 8173 7895 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1095 505 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
9594736 9594736 PRJNA685060_P_NODE_1368_length_848_cov_1.766452_g1293_i0 PRJNA685060 1368 848 1.766452 14.97951296 Zebrafish picornavirus 1 2304617 Viruses Viruses 1417 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g1293 i0 96.816 3 848 27 100 0 1 848 7029 7876 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 2544 1417 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
11379594 11379594 PRJNA685060_P_NODE_4489_length_458_cov_2.000000_g4399_i0 PRJNA685060 4489 458 2 9.16 root 1 Root_unresolved Root_unresolved 752 0   NTclustered gi|1933608805|gb|MW265105.1| 11320 g4399 i0 100 102.401746724891 407 0 100 0 1 407 878 1284 Influenza A virus (A/chicken/Jiangsu/WJ110/2013(H7N9)) segment 4 hemagglutinin (HA) gene, complete cds blastn 46900 752 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
13420133 13420133 PRJNA685060_P_NODE_2091_length_682_cov_1.625616_g2004_i0 PRJNA685060 2091 682 1.625616 11.08670112 Zebrafish picornavirus 1 2304617 Viruses Viruses 1144 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g2004 i0 96.921 3 682 21 100 0 1 682 6305 6986 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 2046 1144 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
13930012 13930012 PRJNA685060_P_NODE_11871_length_271_cov_1.090909_g11781_i0 PRJNA685060 11871 271 1.090909 2.95636339 Alphainfluenzavirus 197911 Viruses Viruses 496 9.55e-136   NTclustered gi|1562367602|gb|MK447370.1| 11320 g11781 i0 99.631 100 271 1 100 0 1 271 371 641 Influenza A virus (A/chicken/China/819/2015(H9N2)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds blastn 27100 496 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
16478868 16478868 PRJNA685060_P_NODE_33_length_2964_cov_4.837426_g27_i0 PRJNA685060 33 2964 4.837426 143.38130664 Alphavirus 11019 Viruses Viruses 5435 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g27 i0 99.764 99.9038461538462 2964 7 100 0 1 2964 11456 8493 Getah virus strain M1, complete genome blastn 296115 5452 0.996881878209831 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
17753876 17753876 PRJNA685060_P_NODE_17954_length_206_cov_4.120301_g17864_i0 PRJNA685060 17954 206 4.120301 8.48782006 Alphavirus 11019 Viruses Viruses 375 9.41e-100   NTclustered gi|125711102|gb|EF375823.1| 59300 g17864 i0 99.517 100.519417475728 207 0 100 1 1 206 399 193 Getah virus strain M1 3' UTR blastn 20707 375 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
19027762 19027762 PRJNA685060_P_NODE_3335_length_540_cov_1.813704_g3245_i0 PRJNA685060 3335 540 1.813704 9.7940016 Alphavirus 11019 Viruses Viruses 998 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g3245 i0 100 100 540 0 100 0 1 540 3058 2519 Getah virus strain M1, complete genome blastn 54000 998 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
21068525 21068525 PRJNA685060_P_NODE_11177_length_281_cov_1.389423_g11087_i0 PRJNA685060 11177 281 1.389423 3.90427863 Zebrafish picornavirus 1 2304617 Viruses Viruses 475 1.2999999999999999e-129   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g11087 i0 97.153 3 281 8 100 0 1 281 4869 5149 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 843 475 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
21578248 21578248 PRJNA685060_P_NODE_12977_length_255_cov_2.038462_g12887_i0 PRJNA685060 12977 255 2.038462 5.1980781 Alphavirus 11019 Viruses Viruses 466 6.98e-127   NTclustered gi|1013288946|dbj|LC079087.1| 59300 g12887 i0 99.608 100 255 1 100 0 1 255 5046 4792 Getah virus genomic RNA, complete genome, strain: MI-110-C2 blastn 25500 466 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
22343385 22343385 PRJNA685060_P_NODE_10258_length_294_cov_1.701357_g10168_i0 PRJNA685060 10258 294 1.701357 5.00198958 Orbivirus magninsulae 3431249 Viruses Viruses 52.8 0.027   NTclustered gi|2672713165|gb|OR645558.1| 881914 g10168 i0 100 0.19047619047619 28 0 10 0 267 294 28 1 MAG: Tribec virus isolate Romania segment 6, complete sequence blastn 56 52.8 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus magninsulae
22853447 22853447 PRJNA685060_P_NODE_1458_length_823_cov_1.832000_g1379_i0 PRJNA685060 1458 823 1.832 15.07736 Alphavirus 11019 Viruses Viruses 1515 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g1379 i0 99.878 100 823 1 100 0 1 823 3881 3059 Getah virus strain M1, complete genome blastn 82300 1515 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
24128049 24128049 PRJNA685060_P_NODE_9639_length_305_cov_1.750000_g9549_i0 PRJNA685060 9639 305 1.75 5.3375 Alphavirus 11019 Viruses Viruses 564 2.95e-156   NTclustered gi|157734228|gb|EU015061.1| 59300 g9549 i0 100 100 305 0 100 0 1 305 4324 4020 Getah virus strain M1, complete genome blastn 30500 564 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
24892323 24892323 PRJNA685060_P_NODE_5240_length_420_cov_1.109510_g5150_i0 PRJNA685060 5240 420 1.10951 4.659942 Zebrafish picornavirus 1 2304617 Viruses Viruses 721 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g5150 i0 97.619 3 420 10 100 0 1 420 5884 6303 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 1260 721 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
25402582 25402582 PRJNA685060_P_NODE_8260_length_331_cov_1.193798_g8170_i0 PRJNA685060 8260 331 1.193798 3.95147138 Alphainfluenzavirus 197911 Viruses Viruses 606 5.299999999999998e-169   NTclustered gi|1575372779|gb|MK530408.1| 11320 g8170 i0 99.698 100 331 1 100 0 1 331 932 602 Influenza A virus (A/chicken/China/0606-17/2013(H7N9)) segment 5 nucleocapsid protein (NP) gene, partial cds blastn 33100 606 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;