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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA683902" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683902 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5004111 5004111 PRJNA683902_S_NODE_39404_length_151_cov_2.666667_g38960_i0 PRJNA683902 39404 151 2.666667 4.02666717 Fungi 4751 Fungi Fungi 279 5.19e-71   NTclustered gi|1694443677|ref|NG_065498.1| 4841 g38960 i0 100 100.013245033113 151 0 100 0 1 151 790 640 Mucor racemosus NRRL 3640 18S rRNA gene, partial sequence; from TYPE material blastn 15102 279 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
7044070 7044070 PRJNA683902_S_NODE_40086_length_150_cov_1.230088_g39642_i0 PRJNA683902 40086 150 1.230088 1.845132 Halteromyces radiatus 101107 Fungi Fungi 167 4.18e-37   NTclustered gi|2323730602|ref|XM_051542191.1| 101107 g39642 i0 86.667 90.8133333333333 150 20 100 0 1 150 1278 1129 Halteromyces radiatus translation elongation factor EF-1 alpha (BX664DRAFT_296209), mRNA blastn 13622 167 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
15968022 15968022 PRJNA683902_S_NODE_29053_length_182_cov_2.241379_g28609_i0 PRJNA683902 29053 182 2.241379 4.07930978 Mucor racemosus 4841 Fungi Fungi 322 1.07e-83   NTclustered gi|225134681|gb|FJ345353.1| 4841 g28609 i0 98.895 96.4010989010989 181 1 99 1 1 181 2383 2204 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17545 322 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
18517408 18517408 PRJNA683902_S_NODE_28035_length_187_cov_1.280000_g27591_i0 PRJNA683902 28035 187 1.28 2.3936 Umbelopsis ramanniana 41833 Fungi Fungi 141 3.32e-29   NTclustered gi|2323686361|ref|XM_051588234.1| 1314678 g27591 i0 81.609 17.7005347593583 174 29 93 1 5 178 390 560 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_236303), mRNA blastn 3310 141 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
21067762 21067762 PRJNA683902_S_NODE_27517_length_189_cov_3.467105_g27073_i0 PRJNA683902 27517 189 3.467105 6.55282845 Mucor racemosus 4841 Fungi Fungi 348 1.85e-91   NTclustered gi|225134681|gb|FJ345353.1| 4841 g27073 i0 100 30.1269841269841 188 0 99 0 2 189 3975 3788 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5694 348 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
22852607 22852607 PRJNA683902_S_NODE_16398_length_282_cov_2.314286_g15954_i0 PRJNA683902 16398 282 2.314286 6.52628652 Mucor 4830 Fungi Fungi 516 7.67e-142   NTclustered gi|2580278665|gb|OR581588.1| 4841 g15954 i0 99.645 96.8120567375886 282 1 100 0 1 282 898 617 Mucor racemosus culture VKM:F-579 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27301 516 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
23618200 23618200 PRJNA683902_S_NODE_29859_length_179_cov_1.549296_g29415_i0 PRJNA683902 29859 179 1.549296 2.77323984 Mucoraceae sp. AI-2023a 3108396 Fungi Fungi 73.1 1.16e-8   NTclustered gi|2715569655|gb|OR965928.1| 3108396 g29415 i0 93.75 0.53072625698324 48 3 27 0 3 50 1676 1723 Mucoraceae sp. AI-2023a actin gene, complete cds blastn 95 73.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae   Mucoraceae sp. AI-2023a
25401731 25401731 PRJNA683902_S_NODE_17320_length_268_cov_53.519481_g16876_i0 PRJNA683902 17320 268 53.519481 143.43220908 Fungi 4751 Fungi Fungi 468 2.06e-127   NTclustered gi|658131632|emb|HF968958.1| 4874 g16876 i0 98.134 144.186567164179 268 5 100 0 1 268 2262 1995 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 38642 468 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;