RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA683902" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683902 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9593778 9593778 PRJNA683902_S_NODE_12428_length_365_cov_16.707317_g11984_i0 PRJNA683902 12428 365 16.707317 60.98170705 Ceratomyxa ayami 1579381 Cnidaria other_Eukaryota 58.4 7.45e-4   NTclustered gi|730837045|gb|KM392429.1| 1579381 g11984 i0 100 0.320547945205479 31 0 8 0 261 291 1236 1206 Ceratomyxa ayami isolate LJ-Lepto 28S ribosomal RNA gene, partial sequence blastn 117 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Ceratomyxidae Ceratomyxa Ceratomyxa ayami
17243249 17243249 PRJNA683902_S_NODE_28214_length_186_cov_1.570470_g27770_i0 PRJNA683902 28214 186 1.57047 2.9210742 Chrysogorgia sp. 3051262 Cnidaria other_Eukaryota 63.9 7.35e-6   NTclustered gi|2689317353|gb|PP410772.1| 3051262 g27770 i0 93.023 0.693548387096774 43 3 23 0 144 186 3532 3574 Chrysogorgia sp. voucher USNM:1660330 large subunit ribosomal RNA gene, partial sequence blastn 129 63.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Chrysogorgiidae Chrysogorgia Chrysogorgia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;