contig_metadata
22 rows where analysis = "blastn", bioproject = "PRJNA683902" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4493305 | 4493305 | PRJNA683902_S_NODE_35524_length_160_cov_3.804878_g35080_i0 | PRJNA683902 | 35524 | 160 | 3.804878 | 6.0878048 | Deinococcus taeanensis | 2737050 | Bacteria | Bacteria | 235 | 1.23e-57 | NTclustered | gi|2105694697|gb|CP083456.1| | 2737050 | g35080 | i0 | 93.125 | 3.54375 | 160 | 11 | 100 | 0 | 1 | 160 | 230941 | 231100 | Deinococcus taeanensis strain TS293 plasmid p_TS293_2, complete sequence | blastn | 567 | 235 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus taeanensis | ||
| 5003545 | 5003545 | PRJNA683902_S_NODE_14464_length_316_cov_21.637993_g14020_i0 | PRJNA683902 | 14464 | 316 | 21.637993 | 68.37605788 | Deinococcus | 1298 | Bacteria | Bacteria | 460 | 4.15e-125 | NTclustered | gi|2581867323|gb|OR600233.1| | 47478 | g14020 | i0 | 99.216 | 83.4556962025316 | 255 | 2 | 81 | 0 | 2 | 256 | 255 | 1 | Deinococcus sp. strain RM 16S ribosomal RNA gene, partial sequence | blastn | 26372 | 464 | 0.991379310344828 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 6279842 | 6279842 | PRJNA683902_S_NODE_7445_length_639_cov_85.461794_g6970_i1 | PRJNA683902 | 7445 | 639 | 85.461794 | 546.10086366 | Deinococcus | 1298 | Bacteria | Bacteria | 1061 | 0 | NTclustered | gi|470486828|ref|NR_076782.1| | 502394 | g6970 | i1 | 96.714 | 306.787167449139 | 639 | 18 | 99 | 3 | 2 | 639 | 1049 | 1685 | Deinococcus gobiensis strain I-0 23S ribosomal RNA gene, complete sequence | blastn | 196037 | 1061 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 7043922 | 7043922 | PRJNA683902_S_NODE_22886_length_215_cov_137.207865_g22442_i0 | PRJNA683902 | 22886 | 215 | 137.207865 | 294.99690975 | uncultured Deinococcus sp. | 158789 | Bacteria | Bacteria | 268 | 1.73e-67 | NTclustered | gi|281313228|gb|GU214129.1| | 158789 | g22442 | i0 | 100 | 154.73488372093 | 145 | 0 | 67 | 0 | 71 | 215 | 1453 | 1309 | Uncultured Deinococcus sp. clone IAFpp7118 16S ribosomal RNA gene, partial sequence | blastn | 33268 | 268 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | uncultured Deinococcus sp. | ||
| 8318605 | 8318605 | PRJNA683902_S_NODE_6427_length_745_cov_44.381356_g6031_i1 | PRJNA683902 | 6427 | 745 | 44.381356 | 330.6411022 | Deinococcus sp. KNUC1210 | 2917691 | Bacteria | Bacteria | 865 | 0 | NTclustered | gi|2197029603|gb|CP092190.1| | 2917691 | g6031 | i1 | 87.682 | 288.045637583893 | 755 | 78 | 100 | 11 | 1 | 745 | 1426842 | 1427591 | Deinococcus sp. KNUC1210 chromosome, complete genome | blastn | 214594 | 865 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. KNUC1210 | ||
| 8318640 | 8318640 | PRJNA683902_S_NODE_8847_length_527_cov_52.373469_g8424_i0 | PRJNA683902 | 8847 | 527 | 52.373469 | 276.00818163 | Deinococcus grandis | 57498 | Bacteria | Bacteria | 723 | 0 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g8424 | i0 | 91.477 | 216.628083491461 | 528 | 42 | 100 | 3 | 1 | 527 | 423935 | 423410 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 114163 | 723 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 12144631 | 12144631 | PRJNA683902_S_NODE_20290_length_235_cov_56.449495_g19846_i0 | PRJNA683902 | 20290 | 235 | 56.449495 | 132.65631325 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 429 | 8.33e-116 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g19846 | i0 | 99.574 | 177.255319148936 | 235 | 1 | 100 | 0 | 1 | 235 | 1636292 | 1636058 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 41655 | 429 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 17753530 | 17753530 | PRJNA683902_S_NODE_39934_length_150_cov_2.035398_g39490_i0 | PRJNA683902 | 39934 | 150 | 2.035398 | 3.053097 | Deinococcus | 1298 | Bacteria | Bacteria | 252 | 1.12e-62 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g39490 | i0 | 97.297 | 13.5533333333333 | 148 | 4 | 99 | 0 | 1 | 148 | 514278 | 514131 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 2033 | 252 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 17753718 | 17753718 | PRJNA683902_S_NODE_9694_length_477_cov_71.300000_g9257_i0 | PRJNA683902 | 9694 | 477 | 71.3 | 340.101 | Deinococcus | 1298 | Bacteria | Bacteria | 675 | 0 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g9257 | i0 | 95.105 | 270.660377358491 | 429 | 19 | 90 | 2 | 1 | 429 | 73076 | 72650 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 129105 | 680 | 0.992647058823529 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 18517555 | 18517555 | PRJNA683902_S_NODE_7355_length_648_cov_83.867430_g6970_i0 | PRJNA683902 | 7355 | 648 | 83.86743 | 543.4609464 | Deinococcus actinosclerus | 1768108 | Bacteria | Bacteria | 1007 | 0 | NTclustered | gi|972944657|gb|CP013910.1| | 1768108 | g6970 | i0 | 94.785 | 243.578703703704 | 652 | 24 | 100 | 10 | 1 | 648 | 74912 | 74267 | Deinococcus actinosclerus strain BM2 chromosome, complete genome | blastn | 157839 | 1007 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus actinosclerus | ||
| 19027614 | 19027614 | PRJNA683902_S_NODE_9695_length_477_cov_44.072727_g9258_i0 | PRJNA683902 | 9695 | 477 | 44.072727 | 210.22690779 | Deinococcus | 1298 | Bacteria | Bacteria | 529 | 1.7599999999999993e-145 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g9258 | i0 | 89.044 | 286.654088050314 | 429 | 44 | 90 | 3 | 49 | 477 | 423258 | 423683 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 136734 | 529 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 19792183 | 19792183 | PRJNA683902_S_NODE_17836_length_261_cov_101.361607_g17392_i0 | PRJNA683902 | 17836 | 261 | 101.361607 | 264.55379427 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 460 | 3.3399999999999995e-125 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g17392 | i0 | 98.473 | 531.954022988506 | 262 | 3 | 100 | 1 | 1 | 261 | 1637947 | 1637686 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 138840 | 460 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 19792432 | 19792432 | PRJNA683902_S_NODE_6376_length_752_cov_61.739860_g6031_i0 | PRJNA683902 | 6376 | 752 | 61.73986 | 464.2837472 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 929 | 0 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g6031 | i0 | 88.991 | 353.4375 | 763 | 68 | 100 | 14 | 1 | 752 | 1637686 | 1638443 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 265785 | 929 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 20301532 | 20301532 | PRJNA683902_S_NODE_11676_length_389_cov_164.369318_g11232_i0 | PRJNA683902 | 11676 | 389 | 164.369318 | 639.39664702 | Deinococcus | 1298 | Bacteria | Bacteria | 612 | 1.36e-170 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g11232 | i0 | 95.337 | 322.969151670951 | 386 | 17 | 99 | 1 | 1 | 386 | 73076 | 72692 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 125635 | 617 | 0.991896272285251 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 21577275 | 21577275 | PRJNA683902_S_NODE_11677_length_389_cov_130.335227_g11233_i0 | PRJNA683902 | 11677 | 389 | 130.335227 | 507.00403303 | Deinococcus | 1298 | Bacteria | Bacteria | 490 | 6.649999999999998e-134 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g11233 | i0 | 89.637 | 211.928020565553 | 386 | 38 | 99 | 2 | 4 | 389 | 423300 | 423683 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 82440 | 490 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 21577400 | 21577400 | PRJNA683902_S_NODE_16417_length_281_cov_45.512295_g15973_i0 | PRJNA683902 | 16417 | 281 | 45.512295 | 127.88954895 | Deinococcus | 1298 | Bacteria | Bacteria | 364 | 2.929999999999999e-96 | NTclustered | gi|470488003|ref|NR_076846.1| | 55148 | g15973 | i0 | 90.323 | 215.23487544484 | 279 | 26 | 99 | 1 | 3 | 281 | 564 | 841 | Deinococcus proteolyticus strain MRP 23S ribosomal RNA gene, complete sequence | blastn | 60481 | 364 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus proteolyticus | ||
| 21577745 | 21577745 | PRJNA683902_S_NODE_30197_length_177_cov_185.371429_g29753_i0 | PRJNA683902 | 30197 | 177 | 185.371429 | 328.10742933 | Deinococcus | 1298 | Bacteria | Bacteria | 320 | 3.71e-83 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g29753 | i0 | 100 | 227.09604519774 | 173 | 0 | 98 | 0 | 5 | 177 | 73221 | 73393 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 40196 | 320 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 21578064 | 21578064 | PRJNA683902_S_NODE_7937_length_596_cov_80.799642_g7532_i0 | PRJNA683902 | 7937 | 596 | 80.799642 | 481.56586632 | Deinococcus | 1298 | Bacteria | Bacteria | 974 | 0 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g7532 | i0 | 96.147 | 342.562080536913 | 597 | 21 | 100 | 2 | 1 | 596 | 73393 | 72798 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 204167 | 979 | 0.994892747701736 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 22342680 | 22342680 | PRJNA683902_S_NODE_39198_length_152_cov_1.017391_g38754_i0 | PRJNA683902 | 39198 | 152 | 1.017391 | 1.54643432 | Deinococcus sonorensis | 309891 | Bacteria | Bacteria | 134 | 4.31e-27 | NTclustered | gi|2745307249|gb|CP158299.1| | 694439 | g38754 | i0 | 96.341 | 7.92763157894737 | 82 | 2 | 54 | 1 | 51 | 132 | 1501850 | 1501770 | Deinococcus sonorensis KR-87 chromosome, complete genome | blastn | 1205 | 134 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sonorensis | ||
| 23618024 | 23618024 | PRJNA683902_S_NODE_10819_length_421_cov_114.013021_g6970_i2 | PRJNA683902 | 10819 | 421 | 114.013021 | 479.99481841 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 739 | 0 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g6970 | i2 | 98.337 | 234.209026128266 | 421 | 7 | 100 | 0 | 1 | 421 | 1637307 | 1637727 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 98602 | 739 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 23618025 | 23618025 | PRJNA683902_S_NODE_11019_length_413_cov_50.138298_g10575_i0 | PRJNA683902 | 11019 | 413 | 50.138298 | 207.07117074 | Deinococcus maricopensis | 309887 | Bacteria | Bacteria | 318 | 3.54e-82 | NTclustered | gi|319753907|gb|CP002454.1| | 709986 | g10575 | i0 | 81.119 | 92.4794188861985 | 429 | 53 | 99 | 24 | 1 | 412 | 640161 | 640578 | Deinococcus maricopensis DSM 21211, complete genome | blastn | 38194 | 318 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus maricopensis | ||
| 23618218 | 23618218 | PRJNA683902_S_NODE_32299_length_170_cov_2.879699_g31855_i0 | PRJNA683902 | 32299 | 170 | 2.879699 | 4.8954883 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 265 | 1.68e-66 | NTclustered | gi|1220364820|gb|CP021082.1| | 317577 | g31855 | i0 | 95.21 | 4.01764705882353 | 167 | 8 | 98 | 0 | 1 | 167 | 383771 | 383937 | Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence | blastn | 683 | 265 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;