RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA683902" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 8 ✖

bioproject 1

  • PRJNA683902 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
665337 665337 PRJNA683902_S_NODE_30901_length_175_cov_1.942029_g30457_i0 PRJNA683902 30901 175 1.942029 3.39855075 Gnomoniopsis castaneae mitovirus 1 3115468 Viruses Viruses 100 5.19e-17   NTclustered gi|2654366799|gb|PP133326.1| 3115468 g30457 i0 85.417 0.548571428571429 96 14 55 0 80 175 1744 1649 Gnomoniopsis castaneae mitovirus 1 RdRp gene, complete cds blastn 96 100 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Gnomoniopsis castaneae mitovirus 1
1941325 1941325 PRJNA683902_S_NODE_322_length_4645_cov_374.651476_g304_i0 PRJNA683902 322 4645 374.651476 17402.5610602 Totivirus ni 3432954 Viruses Viruses 8357 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g304 i0 99.35 3.92960172228202 4616 28 99 2 9 4623 4615 1 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 18253 8357 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
3216157 3216157 PRJNA683902_S_NODE_25363_length_201_cov_1.189024_g24919_i0 PRJNA683902 25363 201 1.189024 2.38993824 Phomopsis viticola mitovirus 962_1 2836441 Viruses Viruses 311 2.61e-80   NTclustered gi|2048077198|gb|MZ050806.1| 2836441 g24919 i0 95 0.995024875621891 200 7 99 3 2 200 212 409 Phomopsis viticola mitovirus 962_1 RNA-dependent RNA polymerase gene, complete cds blastn 200 311 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Phomopsis viticola mitovirus 962_1
4493182 4493182 PRJNA683902_S_NODE_20804_length_231_cov_2.376289_g20360_i0 PRJNA683902 20804 231 2.376289 5.48922759 Ripaglys virus 3130696 Viruses Viruses 176 1.17e-39   NTclustered gi|2717320496|gb|PP172998.1| 3130696 g20360 i0 86.667 19.0779220779221 165 14 70 8 62 222 2145 2305 MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence blastn 4407 176 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaglys virus
4493300 4493300 PRJNA683902_S_NODE_34944_length_162_cov_1.872000_g34500_i0 PRJNA683902 34944 162 1.872 3.03264 Alternaria dianthicola narnavirus 1 2992030 Viruses Viruses 126 7.83e-25   NTclustered gi|2324515426|gb|ON843756.1| 2992030 g34500 i0 86.441 0.728395061728395 118 12 72 4 9 124 1440 1325 Alternaria dianthicola narnavirus 1 isolate HNSZ-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds blastn 118 126 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Alternaria dianthicola narnavirus 1
12144719 12144719 PRJNA683902_S_NODE_32410_length_170_cov_1.466165_g31966_i0 PRJNA683902 32410 170 1.466165 2.4924805 Phomopsis viticola mitovirus 962_1 2836441 Viruses Viruses 270 3.61e-68   NTclustered gi|2048077198|gb|MZ050806.1| 2836441 g31966 i0 95.294 1 170 8 100 0 1 170 1862 2031 Phomopsis viticola mitovirus 962_1 RNA-dependent RNA polymerase gene, complete cds blastn 170 270 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Phomopsis viticola mitovirus 962_1
12144722 12144722 PRJNA683902_S_NODE_330_length_4577_cov_602.165639_g312_i0 PRJNA683902 330 4577 602.165639 27561.12129703 Totivirus ichi 3432942 Viruses Viruses 8287 0   NTclustered gi|558066|gb|J04692.1|SCSCOATRNA 11008 g312 i0 99.495 23.8029276818877 4556 23 99 0 19 4574 4579 24 Saccharomyces cerevisiae virus L-A major coat protein, ssRNA-binding protein, and RNA polymerase genes, complete cds blastn 108946 8287 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ichi
23618202 23618202 PRJNA683902_S_NODE_30139_length_178_cov_1.432624_g29695_i0 PRJNA683902 30139 178 1.432624 2.55007072 Phomopsis viticola mitovirus 962_1 2836441 Viruses Viruses 298 1.75e-76   NTclustered gi|2048077198|gb|MZ050806.1| 2836441 g29695 i0 97.701 0.97752808988764 174 3 97 1 6 178 1771 1598 Phomopsis viticola mitovirus 962_1 RNA-dependent RNA polymerase gene, complete cds blastn 174 298 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Phomopsis viticola mitovirus 962_1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;