RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA683902" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 4 ✖

bioproject 1

  • PRJNA683902 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3216235 3216235 PRJNA683902_S_NODE_34463_length_163_cov_3.738095_g34019_i0 PRJNA683902 34463 163 3.738095 6.09309485 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 195 2.13e-45   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g34019 i0 88.095 141.668711656442 168 14 100 5 1 163 3496112 3496278 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 23092 195 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
7043986 7043986 PRJNA683902_S_NODE_29706_length_179_cov_3.711268_g29262_i0 PRJNA683902 29706 179 3.711268 6.64316972 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 126 8.81e-25   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g29262 i0 80.117 116.502793296089 171 32 94 2 1 169 3494758 3494588 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 20854 126 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
15967977 15967977 PRJNA683902_S_NODE_23093_length_214_cov_3.536723_g22649_i0 PRJNA683902 23093 214 3.536723 7.56858722 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 178 2.98e-40   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g22649 i0 81.991 109.023364485981 211 37 99 1 1 211 3497744 3497953 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 23331 178 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
19792127 19792127 PRJNA683902_S_NODE_12576_length_361_cov_3.080247_g12132_i0 PRJNA683902 12576 361 3.080247 11.11969167 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 315 3.95e-81   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g12132 i0 83.631 142.218836565097 336 53 93 1 25 358 3494998 3495333 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 51341 315 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;