RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA683669" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683669 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18517003 18517003 PRJNA683669_P_NODE_18195_length_303_cov_1.534783_g17963_i0 PRJNA683669 18195 303 1.534783 4.65039249 Haloplanus pelagicus 2949995 Archaea Archaea 62.1 4.69e-5   NTclustered gi|2252468271|gb|CP098518.1| 2949995 g17963 i0 97.222 1.73927392739274 36 1 12 0 16 51 612132 612097 Haloplanus sp. HW8-1 chromosome, complete genome blastn 527 62.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus pelagicus
21067319 21067319 PRJNA683669_P_NODE_11017_length_389_cov_0.882911_g10786_i0 PRJNA683669 11017 389 0.882911 3.43452379 uncultured archaeon 115547 Archaea Archaea 327 5.51e-85   NTclustered gi|1032564179|gb|KX029975.1| 115547 g10786 i0 94.366 66.0874035989717 213 12 55 0 1 213 38 250 Uncultured archaeon clone A_OTU_499 16S ribosomal RNA gene, partial sequence blastn 25708 327 1 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;