RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA683669" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683669 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
664961 664961 PRJNA683669_P_NODE_2581_length_818_cov_4.579866_g2388_i0 PRJNA683669 2581 818 4.579866 37.46330388 Linderina pennispora 61395 Fungi Fungi 411 1.18e-109   NTclustered gi|2028322926|ref|XM_040888010.1| 61395 g2388 i0 80.367 66.1491442542787 545 103 66 4 16 558 395 937 Linderina pennispora 60S ribosomal protein L10-A (DL89DRAFT_268696), partial mRNA blastn 54110 411 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
665088 665088 PRJNA683669_P_NODE_9081_length_424_cov_4.387464_g8850_i0 PRJNA683669 9081 424 4.387464 18.60284736 Linderina pennispora 61395 Fungi Fungi 213 1.77e-50   NTclustered gi|2028324380|ref|XM_040885147.1| 61395 g8850 i0 77.904 18.8702830188679 353 70 82 7 38 386 712 364 Linderina pennispora ribosomal protein S24, isoform CRA_j (DL89DRAFT_248548), partial mRNA blastn 8001 213 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
5768636 5768636 PRJNA683669_P_NODE_32205_length_243_cov_0.905882_g31973_i0 PRJNA683669 32205 243 0.905882 2.20129326 Kickxella alabastrina 61397 Fungi Fungi 237 5.63e-58   NTclustered gi|2324010044|ref|XM_051537783.1| 61397 g31973 i0 85.408 36.2469135802469 233 28 95 6 14 243 1 230 Kickxella alabastrina cell division protein kinase putative (BX661DRAFT_193513), partial mRNA blastn 8808 237 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;