contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA683669" and tax_phylum = "Evosea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3215703 | 3215703 | PRJNA683669_P_NODE_12803_length_361_cov_1.868056_g12572_i0 | PRJNA683669 | 12803 | 361 | 1.868056 | 6.74368216 | Dictyostelium discoideum | 44689 | Evosea | other_Eukaryota | 63.9 | 1.58e-5 | NTclustered | gi|66811337|ref|XM_634285.1| | 352472 | g12572 | i0 | 95 | 0.451523545706371 | 40 | 2 | 11 | 0 | 105 | 144 | 309 | 348 | Dictyostelium discoideum AX4 hypothetical protein (DDB_G0282901) mRNA, complete cds | blastn | 163 | 63.9 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 3215755 | 3215755 | PRJNA683669_P_NODE_18563_length_300_cov_1.330396_g18331_i0 | PRJNA683669 | 18563 | 300 | 1.330396 | 3.991188 | Cavenderia fasciculata | 261658 | Evosea | other_Eukaryota | 97.1 | 1.27e-15 | NTclustered | gi|470265703|ref|XM_004361527.1| | 261658 | g18331 | i0 | 82.114 | 0.52 | 123 | 13 | 38 | 5 | 168 | 281 | 156 | 34 | Cavenderia fasciculata annexin VII (nxnA), partial mRNA | blastn | 156 | 97.1 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia fasciculata | ||
| 7552702 | 7552702 | PRJNA683669_P_NODE_1086_length_1204_cov_3.203360_g958_i0 | PRJNA683669 | 1086 | 1204 | 3.20336 | 38.5684544 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 850 | 0 | NTclustered | gi|511083902|dbj|AK419160.1| | 5759 | g958 | i0 | 80.622 | 91.1179401993355 | 1125 | 196 | 93 | 20 | 62 | 1175 | 29 | 1142 | Entamoeba histolytica cDNA clone: Xeh-003B20, actin, complete cds, strain: HM-1:IMSS | blastn | 109706 | 850 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba histolytica | |||
| 10868877 | 10868877 | PRJNA683669_P_NODE_13549_length_352_cov_1.103943_g13318_i0 | PRJNA683669 | 13549 | 352 | 1.103943 | 3.88587936 | Dictyostelium purpureum | 5786 | Evosea | other_Eukaryota | 272 | 2.35e-68 | NTclustered | gi|330845923|ref|XM_003294765.1| | 5786 | g13318 | i0 | 81.818 | 11.1392045454545 | 330 | 54 | 93 | 5 | 3 | 329 | 2886 | 2560 | Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_96126), mRNA | blastn | 3921 | 272 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium purpureum | ||
| 23617820 | 23617820 | PRJNA683669_P_NODE_20219_length_287_cov_1.102804_g19987_i0 | PRJNA683669 | 20219 | 287 | 1.102804 | 3.16504748 | Didymium spongiosum | 289992 | Evosea | other_Eukaryota | 193 | 1.5e-44 | NTclustered | gi|2161226356|gb|MZ313554.1| | 289992 | g19987 | i0 | 79.322 | 7.68989547038328 | 295 | 46 | 100 | 11 | 1 | 287 | 7511 | 7798 | Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 2207 | 193 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Didymiaceae | Didymium | Didymium spongiosum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;