RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA683669" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683669 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8318171 8318171 PRJNA683669_P_NODE_30807_length_245_cov_0.895349_g30575_i0 PRJNA683669 30807 245 0.895349 2.19360505 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 54.7 0.006   NTclustered gi|1752368514|ref|XM_030988441.1| 7668 g30575 i0 100 0.575510204081633 29 0 12 0 214 242 931 959 PREDICTED: Strongylocentrotus purpuratus uncharacterized LOC115925142 (LOC115925142), mRNA blastn 141 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
12144319 12144319 PRJNA683669_P_NODE_21330_length_280_cov_1.859903_g21098_i0 PRJNA683669 21330 280 1.859903 5.2077284 Acanthaster planci 133434 Echinodermata other_Eukaryota 60.2 1.54e-4   NTclustered gi|1229140653|ref|XM_022226767.1| 133434 g21098 i0 92.857 0.15 42 2 15 1 60 101 2796 2836 PREDICTED: Acanthaster planci MTSS1-like protein (LOC110974858), mRNA blastn 42 60.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
22342157 22342157 PRJNA683669_P_NODE_10198_length_402_cov_2.103343_g9967_i0 PRJNA683669 10198 402 2.103343 8.45543886 Patiria miniata 46514 Echinodermata other_Eukaryota 52.8 0.039   NTclustered gi|1944919279|ref|XM_038216504.1| 46514 g9967 i0 100 0.557213930348259 28 0 7 0 100 127 1397 1370 PREDICTED: Patiria miniata uncharacterized LOC119740973 (LOC119740973), transcript variant X2, mRNA blastn 224 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;