RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA683669" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683669 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1941061 1941061 PRJNA683669_P_NODE_6462_length_504_cov_1.250580_g6231_i0 PRJNA683669 6462 504 1.25058 6.3029232 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 193 2.78e-44   NTclustered gi|1619663561|ref|XM_021049773.2| 2652724 g6231 i0 82.432 9.20238095238095 222 34 43 5 234 451 331 551 PREDICTED: Exaiptasia diaphana ATP synthase lipid-binding protein, mitochondrial (LOC110243647), mRNA blastn 4638 193 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
3215841 3215841 PRJNA683669_P_NODE_29643_length_247_cov_0.885057_g29411_i0 PRJNA683669 29643 247 0.885057 2.18609079 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 206 1.6199999999999998e-48   NTclustered gi|2782930007|ref|XM_067073869.1| 252671 g29411 i0 86.559 9.68421052631579 186 25 75 0 6 191 1459 1274 PREDICTED: Clytia hemisphaerica protein transport protein Sec61 subunit alpha (LOC136817544), mRNA blastn 2392 206 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
3215898 3215898 PRJNA683669_P_NODE_3683_length_680_cov_5.128501_g3465_i0 PRJNA683669 3683 680 5.128501 34.8738068 Eunicella cavolini 317547 Cnidaria other_Eukaryota 54.7 0.019   NTclustered gi|2918369540|emb|OZ237722.1| 317547 g3465 i0 100 0.0426470588235294 29 0 4 0 298 326 5240126 5240154 Eunicella cavolini genome assembly, chromosome: 6 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
5768657 5768657 PRJNA683669_P_NODE_3885_length_661_cov_2.389456_g3664_i0 PRJNA683669 3885 661 2.389456 15.79430416 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 412 2.6199999999999998e-110   NTclustered gi|2782873191|ref|XM_067061560.1| 252671 g3664 i0 89.362 49.0136157337368 329 33 50 2 1 328 1138 1465 PREDICTED: Clytia hemisphaerica tubulin alpha-2/alpha-4 chain (LOC136805028), mRNA blastn 32398 412 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
7043668 7043668 PRJNA683669_P_NODE_28366_length_248_cov_0.880000_g28134_i0 PRJNA683669 28366 248 0.88 2.1824 Hydra vulgaris 6087 Cnidaria other_Eukaryota 58.4 4.82e-4   NTclustered gi|2744862524|ref|XM_065798170.1| 6087 g28134 i0 100 0.370967741935484 31 0 13 0 153 183 7916 7946 PREDICTED: Hydra vulgaris uncharacterized LOC101235879 (LOC101235879), transcript variant X2, mRNA blastn 92 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
8318201 8318201 PRJNA683669_P_NODE_34207_length_241_cov_0.904762_g33975_i0 PRJNA683669 34207 241 0.904762 2.18047642 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 195 3.41e-45   NTclustered gi|2782871477|ref|XM_067061169.1| 252671 g33975 i0 82.222 17.1327800829876 225 40 93 0 15 239 522 298 PREDICTED: Clytia hemisphaerica ras-related C3 botulinum toxin substrate 1 (LOC136804570), mRNA blastn 4129 195 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
12144386 12144386 PRJNA683669_P_NODE_28830_length_248_cov_0.880000_g28598_i0 PRJNA683669 28830 248 0.88 2.1824 Pocillopora verrucosa 203993 Cnidaria other_Eukaryota 67.6 8.01e-7   NTclustered gi|2751571412|ref|XM_066172543.1| 203993 g28598 i0 95.238 13.741935483871 42 2 17 0 4 45 263 222 PREDICTED: Pocillopora verrucosa uncharacterized protein (LOC131793887), transcript variant X2, mRNA blastn 3408 67.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora verrucosa
17242824 17242824 PRJNA683669_P_NODE_14014_length_346_cov_1.128205_g13783_i0 PRJNA683669 14014 346 1.128205 3.9035893 Hydra vulgaris 6087 Cnidaria other_Eukaryota 58.4 7.04e-4   NTclustered gi|2744786543|ref|XM_047272185.2| 6087 g13783 i0 100 0.447976878612717 31 0 9 0 94 124 909 879 PREDICTED: Hydra vulgaris uncharacterized LOC124808953 (LOC124808953), mRNA blastn 155 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
18516935 18516935 PRJNA683669_P_NODE_11415_length_382_cov_0.996764_g11184_i0 PRJNA683669 11415 382 0.996764 3.80763848 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 121 9.85e-23   NTclustered gi|2782927081|ref|XM_067073194.1| 252671 g11184 i0 89.474 7.17015706806283 95 10 25 0 287 381 529 623 PREDICTED: Clytia hemisphaerica vacuolar protein sorting-associated protein 4B-like (LOC136816865), mRNA blastn 2739 121 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
18517158 18517158 PRJNA683669_P_NODE_6095_length_520_cov_1.310962_g5865_i0 PRJNA683669 6095 520 1.310962 6.8170024 Anemonia sulcata 6108 Cnidaria other_Eukaryota 63.9 2.35e-5   NTclustered gi|2917940701|emb|OZ237558.1| 6108 g5865 i0 100 1.96923076923077 34 0 7 0 381 414 14052272 14052239 Anemonia sulcata genome assembly, chromosome: 4 blastn 1024 63.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
19026553 19026553 PRJNA683669_P_NODE_14215_length_343_cov_1.877778_g13984_i0 PRJNA683669 14215 343 1.877778 6.44077854 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.003   NTclustered gi|2198158399|gb|MW618101.1| 308606 g13984 i0 100 0.352769679300292 30 0 9 0 221 250 1068 1039 Dynamena pumila snail mRNA, complete cds blastn 121 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Sertulariidae Dynamena Dynamena pumila
19791894 19791894 PRJNA683669_P_NODE_23216_length_269_cov_1.091837_g22984_i0 PRJNA683669 23216 269 1.091837 2.93704153 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 193 1.39e-44   NTclustered gi|2519002477|ref|XM_057452852.1| 13093 g22984 i0 84.264 54.8624535315985 197 31 73 0 2 198 1874 1678 PREDICTED: Hydractinia symbiolongicarpus dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like (LOC130647112), mRNA blastn 14758 193 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
21067406 21067406 PRJNA683669_P_NODE_21577_length_279_cov_1.145631_g21345_i0 PRJNA683669 21577 279 1.145631 3.19631049 Hydra vulgaris 6087 Cnidaria other_Eukaryota 167 8.789999999999999e-37   NTclustered gi|2744830666|ref|XM_002156791.5| 6087 g21345 i0 85.897 21.6810035842294 156 22 56 0 113 268 52 207 PREDICTED: Hydra vulgaris ras-like GTP-binding protein RHO (LOC100204217), transcript variant X1, mRNA blastn 6049 167 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
22342215 22342215 PRJNA683669_P_NODE_18158_length_303_cov_3.204348_g17926_i0 PRJNA683669 18158 303 3.204348 9.70917444 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 411 4.039999999999999e-110   NTclustered gi|2782844603|ref|XM_067056021.1| 252671 g17926 i0 91.089 99.3201320132013 303 27 100 0 1 303 1383 1081 PREDICTED: Clytia hemisphaerica tubulin beta-4B chain (LOC136799316), mRNA blastn 30094 411 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;