RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA683669" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA683669 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12144418 12144418 PRJNA683669_P_NODE_32990_length_242_cov_0.911243_g32758_i0 PRJNA683669 32990 242 0.911243 2.20520806 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 150 7.509999999999998e-32   NTclustered gi|2874254132|emb|OY970217.1| 1672391 g32758 i0 78.512 8.38429752066116 242 42 99 8 1 240 3600476 3600709 MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 blastn 2029 150 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
14693865 14693865 PRJNA683669_P_NODE_14552_length_340_cov_0.865169_g14321_i0 PRJNA683669 14552 340 0.865169 2.9415746 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 60.2 1.92e-4   NTclustered gi|2874254062|emb|OY970386.1| 1672391 g14321 i0 100 0.0941176470588235 32 0 9 0 252 283 1999006 1998975 MAG: uncultured Chloroflexia bacterium isolate MFD03726.bin.c.14 genome assembly, chromosome: 1 blastn 32 60.2 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;