contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA683669" and tax_phylum = "Apicomplexa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 665015 | 665015 | PRJNA683669_P_NODE_32281_length_243_cov_0.905882_g32049_i0 | PRJNA683669 | 32281 | 243 | 0.905882 | 2.20129326 | Plasmodium malariae | 5858 | SAR_Eukaryotes | SAR_Eukaryotes | 63.9 | 1.01e-5 | NTclustered | gi|1624469197|ref|XM_029008392.1| | 5858 | g32049 | i0 | 82.192 | 2.48559670781893 | 73 | 13 | 30 | 0 | 154 | 226 | 1861 | 1933 | Plasmodium malariae conserved Plasmodium protein, unknown function (PmUG01_14079400), partial mRNA | blastn | 604 | 63.9 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium malariae | ||
| 1940946 | 1940946 | PRJNA683669_P_NODE_23442_length_267_cov_1.587629_g23210_i0 | PRJNA683669 | 23442 | 267 | 1.587629 | 4.23896943 | Besnoitia besnoiti | 94643 | SAR_Eukaryotes | SAR_Eukaryotes | 65.8 | 3.14e-6 | NTclustered | gi|1673115281|ref|XM_029362947.1| | 94643 | g23210 | i0 | 84.615 | 0.243445692883895 | 65 | 10 | 24 | 0 | 141 | 205 | 3341 | 3277 | Besnoitia besnoiti Pumilio-family RNA binding repeat-containing protein (BESB_044960), partial mRNA | blastn | 65 | 65.8 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Sarcocystidae | Besnoitia | Besnoitia besnoiti | ||
| 2450138 | 2450138 | PRJNA683669_P_NODE_16622_length_318_cov_0.942857_g16391_i0 | PRJNA683669 | 16622 | 318 | 0.942857 | 2.99828526 | Plasmodium | 5820 | SAR_Eukaryotes | SAR_Eukaryotes | 263 | 1.26e-65 | NTclustered | gi|17028074|gb|L40815.1|PFAHSP70 | 5821 | g16391 | i0 | 81.847 | 70.9842767295598 | 314 | 55 | 98 | 1 | 3 | 314 | 1969 | 2282 | Plasmodium berghei heat shock protein 70 (hsp70) gene, complete cds | blastn | 22573 | 263 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium berghei | ||
| 7043667 | 7043667 | PRJNA683669_P_NODE_28206_length_248_cov_1.542857_g27974_i0 | PRJNA683669 | 28206 | 248 | 1.542857 | 3.82628536 | Plasmodium reichenowi | 5854 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.022 | NTclustered | gi|1145260929|ref|XM_012908485.2| | 5854 | g27974 | i0 | 100 | 0.112903225806452 | 28 | 0 | 11 | 0 | 58 | 85 | 582 | 555 | Plasmodium reichenowi eukaryotic translation initiation factor 3 subunit 8, putative partial mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium reichenowi | ||
| 8318096 | 8318096 | PRJNA683669_P_NODE_18807_length_298_cov_1.013333_g18575_i0 | PRJNA683669 | 18807 | 298 | 1.013333 | 3.01973234 | Plasmodium knowlesi | 5850 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.028 | NTclustered | gi|1976645069|ref|XM_002257463.2| | 5851 | g18575 | i0 | 100 | 0.0939597315436242 | 28 | 0 | 9 | 0 | 59 | 86 | 10 | 37 | Plasmodium knowlesi strain H SICAvar, type I (fragment) (PKNH_0100300), partial mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium knowlesi | ||
| 9593500 | 9593500 | PRJNA683669_P_NODE_12768_length_362_cov_1.065744_g12537_i0 | PRJNA683669 | 12768 | 362 | 1.065744 | 3.85799328 | Eimeria maxima | 5804 | SAR_Eukaryotes | SAR_Eukaryotes | 63.9 | 1.59e-5 | NTclustered | gi|915135556|ref|XM_013480917.1| | 5804 | g12537 | i0 | 100 | 0.187845303867403 | 34 | 0 | 9 | 0 | 303 | 336 | 1011 | 978 | Eimeria maxima hypothetical protein, conserved partial mRNA | blastn | 68 | 63.9 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Eimeria | Eimeria maxima | ||
| 13418991 | 13418991 | PRJNA683669_P_NODE_3131_length_742_cov_1.361734_g2922_i0 | PRJNA683669 | 3131 | 742 | 1.361734 | 10.10406628 | Besnoitia besnoiti | 94643 | SAR_Eukaryotes | SAR_Eukaryotes | 455 | 4.8500000000000006e-123 | NTclustered | gi|1673126454|ref|XM_029361296.1| | 94643 | g2922 | i0 | 84.222 | 65.05525606469 | 469 | 72 | 63 | 2 | 114 | 581 | 468 | 1 | Besnoitia besnoiti putative elongation factor 1-alpha (EF-1-ALPHA) (BESB_026160), partial mRNA | blastn | 48271 | 455 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Sarcocystidae | Besnoitia | Besnoitia besnoiti | ||
| 18517200 | 18517200 | PRJNA683669_P_NODE_9775_length_410_cov_1.195846_g9544_i0 | PRJNA683669 | 9775 | 410 | 1.195846 | 4.9029686 | Cystoisospora suis | 483139 | SAR_Eukaryotes | SAR_Eukaryotes | 311 | 5.88e-80 | NTclustered | gi|2795629584|ref|XM_068068822.1| | 483139 | g9544 | i0 | 82.997 | 74.4878048780488 | 347 | 55 | 84 | 4 | 7 | 351 | 1266 | 1610 | Cystoisospora suis tubulin alpha chain (CSUI_008696), mRNA | blastn | 30540 | 311 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Sarcocystidae | Cystoisospora | Cystoisospora suis | ||
| 21577182 | 21577182 | PRJNA683669_P_NODE_9717_length_411_cov_1.233728_g9486_i0 | PRJNA683669 | 9717 | 411 | 1.233728 | 5.07062208 | Eimeria | 5800 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.039 | NTclustered | gi|916418939|ref|XM_013375247.1| | 5802 | g9486 | i0 | 94.286 | 0.289537712895377 | 35 | 1 | 8 | 1 | 145 | 178 | 893 | 927 | Eimeria tenella uncharacterized protein (ETH_00036470), partial mRNA | blastn | 119 | 52.8 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Eimeria | Eimeria tenella | ||
| 22342268 | 22342268 | PRJNA683669_P_NODE_25938_length_251_cov_1.297753_g25706_i0 | PRJNA683669 | 25938 | 251 | 1.297753 | 3.25736003 | Eimeria necatrix | 51315 | SAR_Eukaryotes | SAR_Eukaryotes | 56.5 | 0.002 | NTclustered | gi|921128087|ref|XM_013583159.1| | 51315 | g25706 | i0 | 100 | 0.119521912350598 | 30 | 0 | 12 | 0 | 185 | 214 | 6652 | 6623 | Eimeria necatrix hypothetical protein, conserved partial mRNA | blastn | 30 | 56.5 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Eimeria | Eimeria necatrix | ||
| 22342370 | 22342370 | PRJNA683669_P_NODE_7798_length_458_cov_1.392208_g7567_i0 | PRJNA683669 | 7798 | 458 | 1.392208 | 6.37631264 | Eimeria tenella | 5802 | SAR_Eukaryotes | SAR_Eukaryotes | 58.4 | 0.001 | NTclustered | gi|916414351|ref|XM_013372953.1| | 5802 | g7567 | i0 | 100 | 0.318777292576419 | 31 | 0 | 7 | 0 | 423 | 453 | 5267 | 5237 | Eimeria tenella uncharacterized protein (ETH_00027635), partial mRNA | blastn | 146 | 58.4 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Eimeria | Eimeria tenella | ||
| 23617920 | 23617920 | PRJNA683669_P_NODE_3339_length_717_cov_1.776398_g3123_i0 | PRJNA683669 | 3339 | 717 | 1.776398 | 12.73677366 | Plasmodium yoelii | 5861 | SAR_Eukaryotes | SAR_Eukaryotes | 126 | 4.1699999999999996e-24 | NTclustered | gi|82597122|ref|XM_721455.1| | 5861 | g3123 | i0 | 70.894 | 2.51464435146443 | 615 | 160 | 84 | 17 | 36 | 640 | 137 | 742 | Plasmodium yoelii uncharacterized protein (PY17X_0516200), partial mRNA | blastn | 1803 | 126 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium yoelii | ||
| 24891049 | 24891049 | PRJNA683669_P_NODE_16020_length_324_cov_1.179283_g15789_i0 | PRJNA683669 | 16020 | 324 | 1.179283 | 3.82087692 | Eimeria tenella | 5802 | SAR_Eukaryotes | SAR_Eukaryotes | 56.5 | 0.002 | NTclustered | gi|916414713|ref|XM_013373134.1| | 5802 | g15789 | i0 | 100 | 0.182098765432099 | 30 | 0 | 9 | 0 | 148 | 177 | 1096 | 1067 | Eimeria tenella uncharacterized protein (ETH_00027175), partial mRNA | blastn | 59 | 56.5 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Eimeria | Eimeria tenella |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;